Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00081 ATGTCAGAAGAATATAATGAGAGTAGTACTCATGAGAATGAGAGGGAAGTGCAGGCTGATGACAGTTCAATGGGATCTTCTGGCCAGAAGTGTTCATCCTTTGACTTGAATGAAGAAGCTAGTAGTGAAGATAACAATGACAATGATAATGAGGCATGTGATGAACTCATAGGTGATGAGGAGGGATTTGAGAAAGGGAATATTGAGGATGAAGGTACTTCAAAGAACACAACAAGAGATCAAGGAAATGAAAGAAGAAGTGGTGTGAGGCAATATGTTAGATCAAAGATGCCTAGGCTTCGGTGGACTCCTGACCTTCATCACTCCTTTGTTCATGCTGTTGAAAGGCTTGGTGGTCAAGAAAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTACCGAAGCAAGAAACTTGACGAGGCTGGGCAAGTACTAAGTCGAACATACAGATCAACCCATGAACTAGGTCGTATTTCTCATGGAGCCCATCATCAGTCCATGAGTCCTCATCATCAACATTTCAAGATGGGAAATGGTGGAATTATTCTAACAAGTAACTACAACGAGCATGGTTATTTCCAAGGTCTCATGCATCCTTCCTCCTTATCACATTCACATTCAAAGCCCATTGATTCAAGGCATCAACAATGGTACTCTAATCATCAACCTTTTAGAAGACCAAGTTACCTAAGCAATGAAGTTGTCCCCTCAACTTCAAACCAAATTCAACTAATGGATGCTAGCAGACTTGCACCCATGAGACCAAGCCAATTTATTGAAGAGAAAAGGTGGCCTCCATTAGAAACAATGAACAATCACCATTGGAAGAAAAACTACACAACACAATTTGGCAGACCAGCTGAGGTGATCAGTTTTGGAAACAACACAAGAATCAGGGAACATCTATCAAACCCAGATGAGCATTCCAACAGTTTAAAGCTAGATTTTGATCCTCCATTTCGGATTAAGTTGAATCAAGAAAATTTGGAGACAGAGAAACAAATGGTGCCTGATTTGCAACTGAGTCTAAGTCAGAAAAATGGCAACAAGGATGGCAAGAGTGATAATGGCAGAGAAACCCAAGAAATCAACACGAAACTTTCACTCTCTTAG 1161 0.4109 MSEEYNESSTHENEREVQADDSSMGSSGQKCSSFDLNEEASSEDNNDNDNEACDELIGDEEGFEKGNIEDEGTSKNTTRDQGNERRSGVRQYVRSKMPRLRWTPDLHHSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSRTYRSTHELGRISHGAHHQSMSPHHQHFKMGNGGIILTSNYNEHGYFQGLMHPSSLSHSHSKPIDSRHQQWYSNHQPFRRPSYLSNEVVPSTSNQIQLMDASRLAPMRPSQFIEEKRWPPLETMNNHHWKKNYTTQFGRPAEVISFGNNTRIREHLSNPDEHSNSLKLDFDPPFRIKLNQENLETEKQMVPDLQLSLSQKNGNKDGKSDNGRETQEINTKLSLS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00081 386 Gene3D - 97 154 - -
Sebi77g00081 386 MobiDBLite consensus disorder prediction 40 58 - -
Sebi77g00081 386 MobiDBLite consensus disorder prediction 347 366 - -
Sebi77g00081 386 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 153 IPR006447 GO:0003677
Sebi77g00081 386 MobiDBLite consensus disorder prediction 59 89 - -
Sebi77g00081 386 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 154 IPR017930 -
Sebi77g00081 386 FunFam Myb family transcription factor 96 154 - -
Sebi77g00081 386 MobiDBLite consensus disorder prediction 1 19 - -
Sebi77g00081 386 Pfam Myb-like DNA-binding domain 100 150 IPR001005 -
Sebi77g00081 386 MobiDBLite consensus disorder prediction 20 39 - -
Sebi77g00081 386 MobiDBLite consensus disorder prediction 1 89 - -
Sebi77g00081 386 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 72 219 IPR046955 GO:0003700
Sebi77g00081 386 MobiDBLite consensus disorder prediction 347 386 - -
Sebi77g00081 386 SUPERFAMILY Homeodomain-like 96 152 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00081 Sebi-Chr77 1078820 1081000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00081 89 159 G2-like Transcription Factor Family AT2G42660 77.465 1.99e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi77g00081 Myb_DNA-binding 7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00081 - - gmx:100808625 507.679