Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00079 ATGGCTGAGGTGGCTCCCAAGAAGAGCAACACCGAAGCCTCCACCTCCAACTCCATTAACAAAAAGGTAAACACAAATCTTCTATTGGGTAGGTTCGAGCTAGGGAAGCTCCTTGGCCATGGAACCTTCGCGAAGGTCCACCATGCCCGGAACATCAAAACCGGTGAAGGGGTAGCCATAAAGATCATAAACAAAGAGAAGATCCTAAAGACTGGTTTGGTGTCTCACATCAAACGCGAGATCTCCATCCTCCGCCGTGTCCGCCACCCAAACATTGTCCAACTCTTCGAAGTCATGGCCACAAAGACCAAGATCTACTTCGTCATGGAGTATGTTCGTGGTGGTGAGCTCTTCAACAAGGTTGCTAAAGGTAGATTGAAGGAAGAAGTTGCAAGGAAATACTTTCAGCAATTGATTTGTGCTGTGGAGTTTTGTCATGCCAGAGGGGTGTTCCATAGGGATCTAAAGCCTGAAAATTTGTTGCTTGATGAGAATGGTAACCTTAAAGTTTCTGACTTTGGACTCAGTGCTGTGTCTGATCAGATTAGGCAAGATGGGTTGTTCCACACATTTTGTGGGACACCTGCTTATGTTGCTCCTGAGGTTTTGGCTAGGAAAGGGTATGATGGTGCTAAGGTTGATATTTGGTCTTGTGGGGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTGCCTTTTCATGATAGAAATATTATGGCTATGTATAAGAAGATTTACAAGGAATTATCTGACTCTGAGGTTGAGACTAGAAGGAGGAAAATTCACAATAATGCTTCATTGCCTAGACCTGCAAGTTTGAATGCATTTGACATCATATCATTTTCTCAGGGTTTTGATCTTTCTGGATTGTTTGAGGAAAAGGGTGATGAGGCAAGGGTCAGCTTGGAGGGTTCTAGAGAAGGGGTGAAAGGGCCATTGACAATTGCTGCAGAGATATTTGAATTGACACCTTCTTTGGTGGTGGTGGAGGTGAAGAAGAAAGGAGGTGATAAAGCAGAGTATGAGAAATTTTGTAACTCTGAATTGAAACCTGCTTTGGAGAGTTTAATGATGGAGGAATCTGCAACTTCTTCATGCCAAACTACACCTGCTGAACCTTCTCAACCACGTTCACTTTCTGACTCTACCCTCAATATACCTTCAGATACTGAACCTTTGCACTTAGATACCTGA 1191 0.4341 MAEVAPKKSNTEASTSNSINKKVNTNLLLGRFELGKLLGHGTFAKVHHARNIKTGEGVAIKIINKEKILKTGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLICAVEFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVVLFVLMAGYLPFHDRNIMAMYKKIYKELSDSEVETRRRKIHNNASLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKAEYEKFCNSELKPALESLMMEESATSSCQTTPAEPSQPRSLSDSTLNIPSDTEPLHLDT 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00079 396 ProSiteProfiles Protein kinase domain profile. 32 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00079 396 MobiDBLite consensus disorder prediction 357 389 - -
Sebi77g00079 396 SUPERFAMILY Protein kinase-like (PK-like) 28 248 IPR011009 -
Sebi77g00079 396 ProSiteProfiles NAF domain profile. 267 291 IPR018451 GO:0007165
Sebi77g00079 396 MobiDBLite consensus disorder prediction 356 396 - -
Sebi77g00079 396 CDD CIPK_C 273 352 - -
Sebi77g00079 396 FunFam Maternal embryonic leucine zipper kinase 22 255 - -
Sebi77g00079 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Sebi77g00079 396 Gene3D Transferase(Phosphotransferase) domain 1 22 266 - -
Sebi77g00079 396 Pfam NAF domain 269 299 IPR004041 GO:0007165
Sebi77g00079 396 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 18 350 - -
Sebi77g00079 396 Gene3D Kinase associated domain 1, KA1 267 295 - -
Sebi77g00079 396 Gene3D Kinase associated domain 1, KA1 296 357 - -
Sebi77g00079 396 SMART serkin_6 32 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00079 396 FunFam Non-specific serine/threonine protein kinase 23 111 - -
Sebi77g00079 396 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Sebi77g00079 396 Pfam Protein kinase domain 33 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00079 Sebi-Chr77 1036777 1038268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00079 249 390 CBL-interacting serine-threonine protein kinases AT4G18700 52.841 6.46e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi77g00079 Pkinase 2.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00079 - - sspl:121756464 460.685