Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00065 ATGTCTCACAGAAACACAGATAACAGGGATATAATGACATCTGGAAACTTTTCTTGCCTCAATGAACCAGGCTTTGAAGTTATAGCAGTAAATTCCAGATCATCAATAATCTGGACACCCTTATTGTCTTGCACTAGAATCCAAAGCCTTGTTTTATTGCCTAGTTCTTTGTTTAATAACGTTGATGCTGGTTTAAACTGGTTCCAACCAGACTGCAAAAGCTGCGAAAGAGAAGGTGGGCAATGCAAGGCCAAAGAAAACAAATCTAAACACCAATTCGAATGTATAGGCATCCCCCCTACAGGTGGAATCCTAGGCCCTTTTTCGCTGATATTTGTTGGAGTCTTAGCATATTGTATCTATGTAGCTGTCATTGAAAGGAAGAGTTATAAAAGAATCAAAAAGTTTCTGGAGGATTATAAAGCACTTAAGCCTGCCAGATACTCTTATGCTGATATAAAGAGAATCACAAATCAATTTAAGGAAGAACTGGGGCAGGGAGCTTATGGATCTGTCTTCAAAGGAAAGCTATCAAATGAAATTCAGGTCGCTGTTAAGGTCCTAAACACTACAACTGGGAATGGCCAAGAGTTCATCAATGAAATGGAAGCAATGTGTCAAATTCACCATGTCAATGTGGTTCGCTTGGTTGGCTTTTGTGCAGATGGACTCAGGAGAGCTTTGGTGTATGAATTCTTACCAAATGGTTCATTGCAGAAATTCATATCATCTGCAGACACTAAGGATGTCTTTCTAGGTTGGGAAAGGCTACAAGATATTGCTCTCGGTATAGCCAAGGGAATTGAGTATCTTCACCAAGGTTGTGATAAAAGAATTCTCCATTTTGATATCAAACCTCATAATGTATTGCTAGATGACAATTTCACACCCAAAATCTCTGATTTTGGTTTGGCCAAGCTTTGTTCCAAGGACCAAAGTATTGTGTCAATGACCACAGCTAGGGGCACTTTGGGCTACATTGCGCCAGAAGTATTTTCTAGGAACTTTGGCAATGTATCCTATAAGTCAGACGTTTATAGTTTTGGGATGCTGCTGCTTGAAATGGTAGGAGGAAGGAAAATCACTGATGTCACAGCAGAAAATAATAGCCAAGTCTATTATCCACAGTGGATATATAACCTTCTAGAGAACAATGAAGACATACAAATCCATATAGAAGGAGAAGAAGACACTAGAGTTGCAAAGAAGCTATCAATTGTGGGACTGTGGTGCATTCAGTGGCACCCAGTAAATCGTCCAACCATGAAAGCTGTGGTTCAAATGCTTGAAGGAAATGGAGAGAAGTTGGAGATGCCTCCTAATCCTTTTGCCTCTACATCTGCAAGTAGAGCAAGTTCTAGATTTGGTACTGGACGTCTGAACCTAGAGCTAGATGTTATCTCAGAAATAGAGTGA 1416 0.3997 MSHRNTDNRDIMTSGNFSCLNEPGFEVIAVNSRSSIIWTPLLSCTRIQSLVLLPSSLFNNVDAGLNWFQPDCKSCEREGGQCKAKENKSKHQFECIGIPPTGGILGPFSLIFVGVLAYCIYVAVIERKSYKRIKKFLEDYKALKPARYSYADIKRITNQFKEELGQGAYGSVFKGKLSNEIQVAVKVLNTTTGNGQEFINEMEAMCQIHHVNVVRLVGFCADGLRRALVYEFLPNGSLQKFISSADTKDVFLGWERLQDIALGIAKGIEYLHQGCDKRILHFDIKPHNVLLDDNFTPKISDFGLAKLCSKDQSIVSMTTARGTLGYIAPEVFSRNFGNVSYKSDVYSFGMLLLEMVGGRKITDVTAENNSQVYYPQWIYNLLENNEDIQIHIEGEEDTRVAKKLSIVGLWCIQWHPVNRPTMKAVVQMLEGNGEKLEMPPNPFASTSASRASSRFGTGRLNLELDVISEIE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00065 471 Gene3D Transferase(Phosphotransferase) domain 1 233 438 - -
Sebi77g00065 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Sebi77g00065 471 FunFam PR5-like receptor kinase 233 441 - -
Sebi77g00065 471 PANTHER RUST RESISTANCE KINASE LR10-RELATED 130 447 IPR045874 GO:0004672
Sebi77g00065 471 Gene3D Phosphorylase Kinase; domain 1 130 232 - -
Sebi77g00065 471 ProSitePatterns Protein kinases ATP-binding region signature. 164 186 IPR017441 GO:0005524
Sebi77g00065 471 SMART serkin_6 158 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00065 471 Pfam Protein kinase domain 160 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00065 471 ProSiteProfiles Protein kinase domain profile. 158 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00065 471 FunFam S-receptor-like serine/threonine-protein kinase 123 232 - -
Sebi77g00065 471 SUPERFAMILY Protein kinase-like (PK-like) 142 430 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00065 Sebi-Chr77 855369 857383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00065 71 442 Receptor kinase-like Gene Family AT1G66910 45.636 1.58e-115 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sebi77g00065 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00065 - - tpra:123914140 799.275