Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00058 ATGGCTTCTCCTGGTCCTGGTGGAGCATACTCATCTGGTTCCAGTTCTCTTCAAAACTCTGCCTCAGGTTCTGAGGGAGATCATGTTATGGAGCTGAGGAAGAGAAAGAGAATGCAATCCAATAGGGAATCGGCACGTAGATCTAGGATGAGGAAGCAGCAACACCTTGAGGGTCTTAGTGCTCAAGTGGATCAACTCAAGAAGGAGAACAACCAAATCACCACAAACATTGGGATCACTACTCAGATGTATCTCAAAGTGGAGTCTGAGAATGAAATTCTAAGGGTTCAAATGGCTGAACTTAGCAACAGGTTGCAATCACTTAATGAAATCATAAATTACATAAACTCAACCAACAACAACCACAACCTGTTTCAGGAGATTCATTACTTCAATGATTGTGGCTTCATGGAGGACACATGGAACTCTCCTCTCTCTATCAATCAATCAATTATGGCCTCTGCTGATATGTTGATGTATTGA 483 0.4224 MASPGPGGAYSSGSSSLQNSASGSEGDHVMELRKRKRMQSNRESARRSRMRKQQHLEGLSAQVDQLKKENNQITTNIGITTQMYLKVESENEILRVQMAELSNRLQSLNEIINYINSTNNNHNLFQEIHYFNDCGFMEDTWNSPLSINQSIMASADMLMY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00058 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 157 - -
Sebi77g00058 160 SMART brlzneu 29 93 IPR004827 GO:0003700|GO:0006355
Sebi77g00058 160 Coils Coil 84 111 - -
Sebi77g00058 160 MobiDBLite consensus disorder prediction 1 54 - -
Sebi77g00058 160 FunFam BZIP transcription factor 31 82 - -
Sebi77g00058 160 SUPERFAMILY Leucine zipper domain 32 86 IPR046347 GO:0003700|GO:0006355
Sebi77g00058 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 31 77 IPR004827 GO:0003700|GO:0006355
Sebi77g00058 160 Gene3D - 32 85 - -
Sebi77g00058 160 MobiDBLite consensus disorder prediction 27 54 - -
Sebi77g00058 160 CDD bZIP_plant_GBF1 34 84 IPR045314 GO:0003700|GO:0006355
Sebi77g00058 160 MobiDBLite consensus disorder prediction 8 25 - -
Sebi77g00058 160 Pfam bZIP transcription factor 31 91 IPR004827 GO:0003700|GO:0006355
Sebi77g00058 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 36 51 IPR004827 GO:0003700|GO:0006355
Sebi77g00058 160 Coils Coil 49 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00058 Sebi-Chr77 781749 782231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00058 29 160 bZIP Transcription Factor Family AT4G34590 53.285 3.87e-37 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi77g00058 bZIP_1 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00058 K25786 - gmx:778139 167.933