Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00055 ATGCCTTTATGCCTAGAGCGTTTACTTGAAGCTGCTGAGGGATTCTTGGTCTTTGCCTTTGCTTTTGGTGTTTCAGGGCAACAGGGAGATGCTGTTATGAAAGCTGAATTTTGTGTGGAGCCCCCCAACAGAATTAAGCCAAAAGGGAAGCATTATTATACAATATGGCAAACATTGTTTGAGATTGATACGAAGTATGTTCCAATCAAGCCTATTGGCCGAGGAGCATATGGCGTGGTGTGCTCTTCCATCAATAGGGAGACCAATGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATTGTATTGATGCATTGAGAACTTTAAGGGAGCTGAAGCTGCTTAGACATATTCGGCATGAGAATGTCATTGCTTTGAAAGATGTCATGATGCCAATACATAGAACAAGTTTTAAGGACGTCTACTTGGTGTATGAACTCATGGATACAGATCTTCATCAGATTATTAAGTCCTCTCAGCAACTGTCCAATGATCATTGCAAATATTTCTTGTTTCAGCTCCTTCGCGGTCTTAAATATCTTCATTCTGCAAATATTCTTCACCGGGACCTGAAGCCTGGGAATCTGCTCATCAATGCCAATTGTGATTTGAAGATATGTGACTTTGGGCTTGCACGAACCAATGGAGTTGATGGCCAGTTCATGACAGAATATGTTGTCACTCGCTGGTATCGTGCTCCAGAGCTTCTGTTATGTTGTGACAATTATGGAACCTCTATTGATGTCTGGTCTGTAGGATGCATTTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCTGGAACTGAGTGCCTAAACCAGCTGAAACTAATTATAAGTGTTCTTGGAAGCCAGCATGAATCTGATCTTGAGTTTATTGATAATACAAAAGCCAGGAGGTTTATCAAATCACTGCCTTATACAAGGGGCAGGCCCTTCTCTCAGCTATACCCACAAGCAGATCCATTAGCCATAGATTTGTTGCAAAGAATGCTTGTATTTGATCCAACTAAGAGAATTACTGTCTTAGAAGCACTCCAACACCCATATATGGCTGGTCTGTACGATCCAATGCGTAACCCTCCTGCTCAGGTTCCCATCAATCTTGACATAGATGAACATTGGGGAGAACAGATGATTAGGGAAATGATGTGGAATGAGATGCTTCATTATCACCCTGAAACTGCTTCTGCCAATGCATATGTGTGA 1215 0.4132 MPLCLERLLEAAEGFLVFAFAFGVSGQQGDAVMKAEFCVEPPNRIKPKGKHYYTIWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENCIDALRTLRELKLLRHIRHENVIALKDVMMPIHRTSFKDVYLVYELMDTDLHQIIKSSQQLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSQHESDLEFIDNTKARRFIKSLPYTRGRPFSQLYPQADPLAIDLLQRMLVFDPTKRITVLEALQHPYMAGLYDPMRNPPAQVPINLDIDEHWGEQMIREMMWNEMLHYHPETASANAYV 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00055 404 CDD STKc_TEY_MAPK 60 395 - -
Sebi77g00055 404 ProSitePatterns MAP kinase signature. 101 204 IPR003527 GO:0004707|GO:0005524|GO:0006468
Sebi77g00055 404 Gene3D Phosphorylase Kinase; domain 1 53 389 - -
Sebi77g00055 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Sebi77g00055 404 SUPERFAMILY Protein kinase-like (PK-like) 58 360 IPR011009 -
Sebi77g00055 404 SMART serkin_6 66 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00055 404 FunFam Mitogen-activated protein kinase 52 160 - -
Sebi77g00055 404 FunFam Mitogen-activated protein kinase 150 379 - -
Sebi77g00055 404 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 65 362 - -
Sebi77g00055 404 Pfam Protein kinase domain 67 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00055 404 ProSiteProfiles Protein kinase domain profile. 66 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi77g00055 404 Gene3D Transferase(Phosphotransferase) domain 1 150 379 - -
Sebi77g00055 404 ProSitePatterns Protein kinases ATP-binding region signature. 72 96 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00055 Sebi-Chr77 759104 762318 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00055 39 402 MAP Kinase Gene Family AT2G18170 85.165 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi77g00055 Pkinase 3.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00055 K20537 - gmx:100783422 719.539