Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00053 ATGGCCAAAGAGGACAGACACAGAGAAAAAGTGATGATAAAGAGCAAACCCAAATTTGTTGGGGTGAGACAAAGGGCTTCAGGGAAATGGGCTGCAGAGATCAAAGACACATCAAAGAAGATTAGGATGTGGCTTGGTAAGTCTTTGTTTAGTGTTGCTCAGAATCAAGTCCCTGATAATCCTTATGAGGCAGATATGAATATGATAAGCTGCTCAATGGGTGTGACACCAAATTCATCACAGTTTGATTATTCTTGGCCATTGCCATTACCCCAACAAATGATTAATGGGTTACCATTACCAAAAGATGGTTTCAATGAAGAAAGGCAATTTTCTGCCTCAGTATATGCCATGAATGAGTGCTATATGGAGGATACATATGGGTCTAAGTATGAATATGATGCCAATTATCCTTTCTCCCACTTGTTCTGCTTCACTTGA 441 0.3991 MAKEDRHREKVMIKSKPKFVGVRQRASGKWAAEIKDTSKKIRMWLGKSLFSVAQNQVPDNPYEADMNMISCSMGVTPNSSQFDYSWPLPLPQQMINGLPLPKDGFNEERQFSASVYAMNECYMEDTYGSKYEYDANYPFSHLFCFT 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00053 146 ProSiteProfiles AP2/ERF domain profile. 18 46 IPR001471 GO:0003700|GO:0006355
Sebi77g00053 146 SUPERFAMILY DNA-binding domain 18 46 IPR016177 GO:0003677
Sebi77g00053 146 Pfam AP2 domain 17 47 IPR001471 GO:0003700|GO:0006355
Sebi77g00053 146 Gene3D AP2/ERF domain 18 51 IPR036955 GO:0003700|GO:0006355
Sebi77g00053 146 SMART rav1_2 18 60 IPR001471 GO:0003700|GO:0006355
Sebi77g00053 146 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 16 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00053 Sebi-Chr77 735217 735942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00053 15 46 AP2-EREBP Transcription Factor Family AT5G19790 81.250 1.73e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00053 K09286 - gmx:100809046 135.576