Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi77g00035 ATGGATTCGAATTCACATGGTAACCTCGATGAGCAGATTTCTCAGCTCATGCAGTGCAAGCCCTTGTCCGAGCAAGAGGTAAGGGTCTTGTGTGATAAGGCAAAGGAGATTTTGATGGAAGAGAGCAATGTCCAGCCTGTGAAAAGTCCTGTTACAATTTGTGGTGATATTCACGGGCAATTCCATGATCTTGCAGAGCTTTTTCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTATGTTGATCGTGGCTATTATTCTGTCGAAACTGTAACGCTTTTGGTTGCCCTTAAAGTGCGTTATCGTCAGCGTATCACTATTCTGAGGGGAAATCATGAAAGTCGTCAGATTACTCAAGTTTATGGGTTTTATGATGAGTGCTTACGGAAGTATGGTAGTGCTAATGTTTGGAAGATGTTCACTGATTTGTTTGACTACTTTCCGTTGACAGCACTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGGTTGTCCCCATCTATTGAAACCCTCGACAACATACGGAATTTTGATCGTGTACAAGAAGTTCCTCATGAGGGACCCATGTGTGATCTTCTATGGTCTGATCCGGATGATCGCTGTGGTTGGGGTATCTCTCCCAGAGGTGCTGGATATACCTTTGGCCAGGACATATCTGAGCAATTTAACCATACCAATAACTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCATGATCAAAAGGTGGTTACCATATTTAGTGCACCTAATTATTGTTATCGCTGTGGGAACATGGCATCTATCCTTGAAGTTGATGACTGCAAAGGACACACATTCATTCAGGTTGAGCCTCCCTTTTTGTTCCCTACCTAA 891 0.4287 MDSNSHGNLDEQISQLMQCKPLSEQEVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQVEPPFLFPT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi77g00035 296 Pfam Calcineurin-like phosphoesterase 50 241 IPR004843 GO:0016787
Sebi77g00035 296 FunFam Serine/threonine-protein phosphatase 1 293 - -
Sebi77g00035 296 PRINTS Serine/threonine phosphatase family signature 147 173 IPR006186 GO:0016787
Sebi77g00035 296 PRINTS Serine/threonine phosphatase family signature 176 203 IPR006186 GO:0016787
Sebi77g00035 296 PRINTS Serine/threonine phosphatase family signature 232 252 IPR006186 GO:0016787
Sebi77g00035 296 PRINTS Serine/threonine phosphatase family signature 50 77 IPR006186 GO:0016787
Sebi77g00035 296 PRINTS Serine/threonine phosphatase family signature 112 136 IPR006186 GO:0016787
Sebi77g00035 296 PRINTS Serine/threonine phosphatase family signature 79 106 IPR006186 GO:0016787
Sebi77g00035 296 PRINTS Serine/threonine phosphatase family signature 254 270 IPR006186 GO:0016787
Sebi77g00035 296 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 7 289 IPR047129 GO:0004722
Sebi77g00035 296 Gene3D - 1 292 IPR029052 -
Sebi77g00035 296 SMART pp2a_7 22 292 IPR006186 GO:0016787
Sebi77g00035 296 SUPERFAMILY Metallo-dependent phosphatases 7 291 IPR029052 -
Sebi77g00035 296 CDD MPP_PP2A_PP4_PP6 8 290 - -
Sebi77g00035 296 ProSitePatterns Serine/threonine specific protein phosphatases signature. 113 118 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi77g00035 Sebi-Chr77 480295 487995 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi77g00035 14 238 Calmodulin-binding Proteins AT5G63870 34.082 4.37e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi77g00035 K04382 - gmx:100782279 605.134