Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi779g00016 ATGGAGGTTCTAGAGGAAAGAATACAGGTCAACAAAGTTGGACGGTTGACTTGTAGAATGAGCTTCACAGAATTCTGTAATGCAACGGAGTACTTCAGTGAGGACTATGCTATTGGGGTGGGAGTGACTGGGATAATGTACAAGGCAACTCTTCCCATTCCCAATGGTAGGTTCTTGGCAGTTAAGAGAATGTATGATTCTCAGTTTTTTATGAGAAGGTTCGAGTTAGAAATAATGATTCTAGGGAGATACAATCACAGCAACATAGTTCCCCTGCTTGGTTTCTGCATAGAAGAAGAAAGAAATGAAAGGATTTTGGTGTATCAATACATGTCAAATGGAAGGCTTTCTGATTGGTTGAATGATACAACAACCACATTAGGATGGCCTGTAGTTATTAGGATTGCACTTGGTGTAGCAAGAGGTTTATCTTGCCTCCATCATTGCTTGCATATGGCACATCTCAGTATCAGTTCTGAGTGTATCTTGCTAGGAGACAATTTTGAGCCAAAAATATCCAATTTTGGAGAGGCCAAGTTTATGAACCATCATGATCTGAGAAAAAACATGGGATTTGAGAAAGAGGATGTCTATGACTTTGGAAGTTTGCTTTTTGAGCTTATTAGGGGGAAGAAATTTGGTCAAACATATGTGAGTAAAGGTCCTTTTGCCACTTACACATATCCTAATCCTATTAATATGTTGGAGGACCCTTCTGGCTTCTATGATGCCATGGATGAATGTCTAAACAAGATTGAATTTGAAGATGAGGTATCTGCTCTTCTCAGAGTTGCATGTGACTGTGTTCATCCTTCTCATGAGCAGAGGCCGACTATGCTTGACGTATACAGCAAGATGAGCAACATATGGGAGAGAGATGGAATTTGTGAAGATTCTGTGACCTCTTATCAATCTGATTATGTTTCTGCTCCCATAGGAGAAGAATATGTCTAG 954 0.3983 MEVLEERIQVNKVGRLTCRMSFTEFCNATEYFSEDYAIGVGVTGIMYKATLPIPNGRFLAVKRMYDSQFFMRRFELEIMILGRYNHSNIVPLLGFCIEEERNERILVYQYMSNGRLSDWLNDTTTTLGWPVVIRIALGVARGLSCLHHCLHMAHLSISSECILLGDNFEPKISNFGEAKFMNHHDLRKNMGFEKEDVYDFGSLLFELIRGKKFGQTYVSKGPFATYTYPNPINMLEDPSGFYDAMDECLNKIEFEDEVSALLRVACDCVHPSHEQRPTMLDVYSKMSNIWERDGICEDSVTSYQSDYVSAPIGEEYV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi779g00016 317 Gene3D Phosphorylase Kinase; domain 1 2 110 - -
Sebi779g00016 317 Gene3D Transferase(Phosphotransferase) domain 1 111 306 - -
Sebi779g00016 317 Pfam Protein kinase domain 34 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi779g00016 317 SUPERFAMILY Protein kinase-like (PK-like) 17 284 IPR011009 -
Sebi779g00016 317 ProSiteProfiles Protein kinase domain profile. 32 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi779g00016 317 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 20 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi779g00016 Sebi-Chr779 285929 287030 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi779g00016 8 297 Receptor kinase-like Gene Family AT1G27190 30.330 2.07e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi779g00016 Pkinase 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi779g00016 - - gmx:102663800 413.305