Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi779g00015 ATGGGTGATGATAGTGTTGATTTAACTACACCAACAAAAGGCTTAAATGATCCTGTTGATACGTCTAAGGAATGGGTTCCTGAGTGTAATGAAGAAATCAAACCTGTAGTTGGCAGAGTCTTTGATACTTTAGAACAAGGAGGGGATTTTTATCAAAGGTATGCACATATTGCTGGTTTTAGTGCACGTAAAGCAACTGAAACGAAAGATAAAAATGGAGAAATAAAGTGGAAATATTTTCTTTGCTCTAAAGAAGGCTTCAAATTAGAGAAAAATGTGGTTGTAACCGAGTTGCTTGTTGATGATAAAAAGTTGCCTAAAACTAGATGA 330 0.3515 MGDDSVDLTTPTKGLNDPVDTSKEWVPECNEEIKPVVGRVFDTLEQGGDFYQRYAHIAGFSARKATETKDKNGEIKWKYFLCSKEGFKLEKNVVVTELLVDDKKLPKTR 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi779g00015 109 Pfam FAR1 DNA-binding domain 49 92 IPR004330 -
Sebi779g00015 109 MobiDBLite consensus disorder prediction 1 22 - -
Sebi779g00015 109 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi779g00015 Sebi-Chr779 284029 284358 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi779g00015 FAR1 1.4e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi779g00015 - - mtr:120577464 131.339