Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi779g00012 ATGGCTTTCCAGATAAAAAGGGATAGTCTGTTCCAGACCTTATTGTGTTCCTTGTTCAGTATCTTAATGACAAGCCAGGGTACTGAGAGTGATATCTTCTGTTTAAAATCCCTTAAGAATTCCTTGGAAGACCAGTTTAATTTCTTAGCAAGCTGGAACTTCAACAACAATACCGAAGGTTTCATGTGTAGATTTGTTGGTGTTGAATGCTGGCATCCTGATGAGAACAGAGTACTTAATCTCCAACTTTCTAACATGGGCCTCAAAGGCCAGTTTCCACGAGGCATTCGGAATTGCTCGTCATTAACAGGCTTAGACCTTTCATTCAACACTTTCACAGGACCCATCCCATCTGATATTTCAACATTAATCCCATATGTTTCCCACATTGATCTCTCTAATAACAATTTCACTGGTGAAATCCCCATAGCTTTAGCAAACATTACTTACCTAAATACTCTTAAACTTGATAACAACATTTTAAGCGGTCAAATACCACCAGATTTTGGGCAGCTAAGCAGGCTTAAATCAATTTCTTTTGCTAACAATAATTTGTCAGGGCCAGTTCCTGAGTTCTCCCAAGAAGTAATTACTGTTTATGCTAATAATAGTGGACTATGTGGAGGGCCTTTGGAACCATGCTCCGTTGACAGGTCCAATGAATTTCATCAATCATTCAAGACTGGCCTTATTGTTGGTTATGCCTTTTCAGTCACTTCTGCTATTGTTGTTTTTATGTCCTACTCCAACTCTGCACCTTCCAAGCACAGGAAAAACAACCACCTAAACAAAGCTAAACAACTTGGCAAATATATTTCTTCCATCAAAAGGAGGAAGACGCAAAGTATAGCTAATCAGATGCACGGGTTGCTACCTCAGCAGCTGATCTCTGCACTATTGGAAAGATTGACTTCCACTATGAGATTTGAAGAACTCCATGATGCAACAGACTGTTTTGCTGTGGACAATGCTATTGGTGTGGGGAAGATGGGAATGATGTACCAAGGAAGGTTAACTAATGGTCAGTTCCTAGCTGTTAAGAGACTATTTGACTCTCACCTGTTTAAGAGAGAGTTCCTTTCAGAAATAATGATTTTGGGTAAGTATAGACATAGAAACATAGTTCCCCTGTTTGGGTTCTGCAATGAAACAAAAGAATGGATTTTGGCATACCCATACATGTCAAATGGAAGACTTTCCAAATGGTTGCATCCTTTGGAAAGTGAAGTTATGAGATTGAAATGGCCTGAGAGGTTTAACATTGCACTTGGGATAGCAAGAGGGTTGTCATGGCTCCATCATAATTGCAATTTGCATATAGTTCATCTTAATATATGTTCAGAATGTATATTGCTAGATGAGAATTTTGAACCCAAAATATCCAATTTTGGAGAGGCCAAATTTATGATTCCCAACATTGAGGAAGATTTAGGCATCATATTTGAAGCAAATGATGGGAAGAAGGATGTCTATGACTTTGGAAGTGTGCTTTTTGAACTGATTACTGGGGAAACATATGATGAATTGTCTCGTTCATCCAGCACTACTAACCTCTGTGGTAACCCTTCTAATTTTTATAATGCAGTTGATAAATCTCTGATTGGGGAACAATTTGAAAGTGAAGTATGTACTCTCATCAAAATTGCTTGTGAGTGTGTTCAGACTTTACCAGATCAAAGACCAACAATGCTTGAAGTTTACAACAATATGAGGAATATAAGGAAGGGACAGGATGGATTCATTGATGATTCTGACATGCCCGGGGCATCAGAAGTTGCTTCTGTTTTTAGTATAGAGTCTATAGACGAAATTGTCCAGTTATAA 1824 0.3849 MAFQIKRDSLFQTLLCSLFSILMTSQGTESDIFCLKSLKNSLEDQFNFLASWNFNNNTEGFMCRFVGVECWHPDENRVLNLQLSNMGLKGQFPRGIRNCSSLTGLDLSFNTFTGPIPSDISTLIPYVSHIDLSNNNFTGEIPIALANITYLNTLKLDNNILSGQIPPDFGQLSRLKSISFANNNLSGPVPEFSQEVITVYANNSGLCGGPLEPCSVDRSNEFHQSFKTGLIVGYAFSVTSAIVVFMSYSNSAPSKHRKNNHLNKAKQLGKYISSIKRRKTQSIANQMHGLLPQQLISALLERLTSTMRFEELHDATDCFAVDNAIGVGKMGMMYQGRLTNGQFLAVKRLFDSHLFKREFLSEIMILGKYRHRNIVPLFGFCNETKEWILAYPYMSNGRLSKWLHPLESEVMRLKWPERFNIALGIARGLSWLHHNCNLHIVHLNICSECILLDENFEPKISNFGEAKFMIPNIEEDLGIIFEANDGKKDVYDFGSVLFELITGETYDELSRSSSTTNLCGNPSNFYNAVDKSLIGEQFESEVCTLIKIACECVQTLPDQRPTMLEVYNNMRNIRKGQDGFIDDSDMPGASEVASVFSIESIDEIVQL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi779g00012 607 FunFam Leucine-rich repeat receptor-like protein kinase 28 191 - -
Sebi779g00012 607 Gene3D Transferase(Phosphotransferase) domain 1 394 586 - -
Sebi779g00012 607 Gene3D Phosphorylase Kinase; domain 1 279 393 - -
Sebi779g00012 607 SUPERFAMILY Protein kinase-like (PK-like) 301 568 IPR011009 -
Sebi779g00012 607 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 35 204 - -
Sebi779g00012 607 Pfam Protein kinase domain 321 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi779g00012 607 Pfam Leucine rich repeat N-terminal domain 30 71 IPR013210 -
Sebi779g00012 607 SUPERFAMILY L domain-like 28 199 - -
Sebi779g00012 607 ProSiteProfiles Protein kinase domain profile. 319 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi779g00012 607 Gene3D Ribonuclease Inhibitor 29 215 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi779g00012 Sebi-Chr779 268879 270922 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi779g00012 11 587 Receptor kinase-like Gene Family AT3G28450 34.975 7.28e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Sebi779g00012 Pkinase 1.5e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi779g00012 - - psat:127106772 762.296