Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi779g00011 ATGGCTTTCCAAATAAAAAGGGATATTCTGTTCCAGACCTTCTTGTGTTCATTGTTCAGTATCTTAATGACATGTCATGGAACTTACACTGATATCTTCTGTTTGAAATCCCTTAAGGATTCCTTAGAAGACCCGTTTAATTACCTATCCTCATCCTGGAACTTCAACAACTATACCGAAGGTTTCATATGTAGATTTAATGGTGTTGAATGCTGGCATCCTGGTGAGAACAGAGTACTAAATCTCAAACTATCTAACATGGGCCTCAAGGGTCAGTTTCCACAGGGCCTTCAGAATTGCTCTTCATTAGTGGGCTTAGACCTTTCAATCAATGAGCTCACAGGACCCATCCCATCTGATATACATAAATTAATCCCATATGTTACCAGCATTGATCTCTCCAATAACAATTTCATTGGTGAAATTCCCACATCTTTAGCAAACTGCAATTACCTGAATAGTCTTAAACTTGATAACAACATGTTAAGTGGTCAAATCCCTCAAGAACTTGGGCTACTTCCCAGGATTAAAATAATTTCCTTTGCTAACAATCATTTGTCAGGGCCAGTTCCTGTGTTCAGAGAAGGGGTAGTAGTTTCTGTTGATAATTATGCTAATAATAATGGACTTTGTGGAGGGCCTTTGGAACCTTGTTCTGTCAATGAATTCCACCAATCATTCAAGAGTGGCCTTATTGTTGGTTATGTGTTTTCTGTGACAATTTCTGTTATTGTTGCTTTTATGTCCTACTCCTACTATGCACCTTGCGCGCAATTGAAGCTGGATAAAAATAACTACCTAAACAAAATTAAAGAACTTGGCAAATATATTTGTTCAATCACAAGGATGAAGACAGAAAGGTTAGCTGATCAGATGCATGAATTGGTTCCTCTGCTGCAGGTAGAGAAAGGAAGCAAAGAGATCTCTGTACTATTGGAAAGATTGACTTCCACAATATGGTTAGAAGAACTCCGTGATGCAACAAACTGTTTTTCTATAGACAATGCAATTGGGGTGGGGAAGATGGGAATGATGTATCAGGGAAGGCTACCTAATGGTCAATTCCTAGCTGTTAAGAGACTATCTGACCCTCAGCAGTTTAAGAAGCAGTTCCTTTCAGAAATAATGATTCTGGGTAAGTATAGACATAGAAATATAGTTCCCTTGCTTGGCTTCTGCAATGAAAGAAAAGAAAAGATTTTGGCATACTCATACATGTCAAATGGAAGACTTTCCAAATGGTTGCATCCTTTAGAATGTGAAGTTATGAGATTGAAATGGCCTGAGAGGGTCAACATTGCACTTGGGATAGCAAGAGGGTTATCATGGCTACATCATAATTGCAATTTGCATATAGTTCATCTTAATATATGTTCACAATGTGTTTTGCTAGATGAGAATTTTGAACCCAAAATATCTAATTTTGGAGAGGCTAAATTTATGATTCCAAACATTGAGGAAGATTTAGGCATCATATTTGAAGCAAATGATGGGAAGAAGGATGTTTATGACTTCGGTAGTGTGCTTTTTGAACTGATTACAGGGGAAACATATGACGAACTGTGTCGTTCATCAAACACTACTAAACTCTATAGCAACCCTTCAAATTTTTATAATGCAATTGATAAATCTCTAATTGGGGAAGGATTTGAAAATGAAATATATACACTCATCAAAATTGCTTGTGAGTGTGCTCAGCCTTTACCAGATCAAAGGCCAACAATGCTTGAAGTTTACAACATAATTAACAACATAAGGAAGGGACGACAAAGATTTAATGATGATTCTGATGCACTCAGGGGATCCGAAATTGCTTCTGTTACTTGTATAGATGAAATTGTGGAGTTATAA 1851 0.3712 MAFQIKRDILFQTFLCSLFSILMTCHGTYTDIFCLKSLKDSLEDPFNYLSSSWNFNNYTEGFICRFNGVECWHPGENRVLNLKLSNMGLKGQFPQGLQNCSSLVGLDLSINELTGPIPSDIHKLIPYVTSIDLSNNNFIGEIPTSLANCNYLNSLKLDNNMLSGQIPQELGLLPRIKIISFANNHLSGPVPVFREGVVVSVDNYANNNGLCGGPLEPCSVNEFHQSFKSGLIVGYVFSVTISVIVAFMSYSYYAPCAQLKLDKNNYLNKIKELGKYICSITRMKTERLADQMHELVPLLQVEKGSKEISVLLERLTSTIWLEELRDATNCFSIDNAIGVGKMGMMYQGRLPNGQFLAVKRLSDPQQFKKQFLSEIMILGKYRHRNIVPLLGFCNERKEKILAYSYMSNGRLSKWLHPLECEVMRLKWPERVNIALGIARGLSWLHHNCNLHIVHLNICSQCVLLDENFEPKISNFGEAKFMIPNIEEDLGIIFEANDGKKDVYDFGSVLFELITGETYDELCRSSNTTKLYSNPSNFYNAIDKSLIGEGFENEIYTLIKIACECAQPLPDQRPTMLEVYNIINNIRKGRQRFNDDSDALRGSEIASVTCIDEIVEL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi779g00011 616 ProSiteProfiles Protein kinase domain profile. 331 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi779g00011 616 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
Sebi779g00011 616 Gene3D Phosphorylase Kinase; domain 1 297 405 - -
Sebi779g00011 616 SUPERFAMILY Protein kinase-like (PK-like) 311 581 IPR011009 -
Sebi779g00011 616 SUPERFAMILY L domain-like 27 198 - -
Sebi779g00011 616 Pfam Protein kinase domain 333 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi779g00011 616 Gene3D Transferase(Phosphotransferase) domain 1 406 605 - -
Sebi779g00011 616 FunFam Nuclear pore complex protein NUP107 29 192 - -
Sebi779g00011 616 Pfam Leucine rich repeat N-terminal domain 31 72 IPR013210 -
Sebi779g00011 616 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 35 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi779g00011 Sebi-Chr779 260877 262899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi779g00011 11 597 Receptor kinase-like Gene Family AT3G28450 37.438 3.73e-114 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sebi779g00011 Pkinase 1.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi779g00011 - - gmx:100819209 795.423