Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi777g00018 ATGGATGGTGGATCTGTTCATGACTTAATATCAAAAAATAAGAAACTTCAGAGCAAGGATATTGTAAGAATTGCAGTCGATGTGGCCGAGGGGCTCAAGTTTATGAATGATCATGGTGTTCCATACAGAGACCTTAATACGCAGAGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGGGTGTTGGAGAGGCAATGGATTACGAAACTGATGGTTATCGGTGGCTAGCTCCAGAAATAATTGCTGGTGACCCAGAGAGTGTCACAGAGACATGGATGAGTAATGTTTATAGTTTTGGCATGGTAATTTGGGAGATGGTGACTGGTGAGGCTGCCTATTCTGCATTTTCACCTGTGCAAGCAGCAGTGGGCATTGCTGCTTGTGGCCTTAGACCTGAGATCCCCAAGGACTGCCCACAAACTCTAAAATCTCTTATGACAAAGTGCTGGAACAACACCCCTTCAAAACGCCCTCAGTTCTCTGAAATTTTAGCAATATTGCTGCGATCAAACAACACCAATAGGTAA 558 0.4427 MDGGSVHDLISKNKKLQSKDIVRIAVDVAEGLKFMNDHGVPYRDLNTQRILLDKHGNACLGDMGIVTACKGVGEAMDYETDGYRWLAPEIIAGDPESVTETWMSNVYSFGMVIWEMVTGEAAYSAFSPVQAAVGIAACGLRPEIPKDCPQTLKSLMTKCWNNTPSKRPQFSEILAILLRSNNTNR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi777g00018 185 PRINTS Tyrosine kinase catalytic domain signature 34 52 IPR001245 GO:0004672|GO:0006468
Sebi777g00018 185 PRINTS Tyrosine kinase catalytic domain signature 148 170 IPR001245 GO:0004672|GO:0006468
Sebi777g00018 185 PRINTS Tyrosine kinase catalytic domain signature 104 126 IPR001245 GO:0004672|GO:0006468
Sebi777g00018 185 Gene3D Transferase(Phosphotransferase) domain 1 1 183 - -
Sebi777g00018 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi777g00018 185 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 177 - -
Sebi777g00018 185 Pfam Protein tyrosine and serine/threonine kinase 1 176 IPR001245 GO:0004672|GO:0006468
Sebi777g00018 185 SUPERFAMILY Protein kinase-like (PK-like) 1 177 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi777g00018 Sebi-Chr777 396148 398174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi777g00018 1 177 MAP Kinase Kinase Kinase AT4G35780 38.333 1.32e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Sebi777g00018 PK_Tyr_Ser-Thr 1.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi777g00018 - - gmx:100819097 355.91