Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi776g00019 ATGGATGATTCAATGGTTTGGTCAGGGAATAATGGGGATGAAGGTCGTAATGCAGAGGGATTGGGCAGTGTTCCATTGCACAATGAAGACACTGTCGATAATGATGAAGCCAACATACCCATAAATGAAGACTACAACGACTACTCGAATGCAAACTCAAGTGAGAATGAAGATGTGGACATTTACAAGATAGATGATGAAATTGACTTGAAGAGAATTGAGTTAATCAGTTTATCTGAATCTGATTTGAAGAAGTTTCATTTTAGTAGCCTGAAGATGGGGTTTCAATTCTACAATGATTATGCTCAGAAAAGGGGATTTGCAGCTAGAAAATGGAACATTGTAAAAAACAAGATGGGTGAGATCACACAACAGACATTTGTTTGTTTCAAGGAGGGTTACAGGCAGAAGAAGCATATAAAGAGGACTAACCGCAAGAGGAAACCGAGAGCAATGACTAGTCATGACATGTTATCACAACAACATGTCGGGATGTTGCCTGCACATAGGAAGATGGATGAATGTGACTTAATTCAGATGAATAACATGAGAGATGCTGGTATTGGTGTGACACAAATATATGGGTTAGCTGCCAATCAGTCAGGCGGATATGAGAGGATGGCATTTAGAAAGCGAGATATGTATAATGAAATTGAGAGGCAGAAGCGAATCCAAGTTAGTGATGTGAGAGCTGTTTTTGCTTATCTTAGAGAATTGCAAGCCGCAATGAGAGGAAAGTTACCAAGCTCAGTTATCACAGATGGGGATCTTGCGATGAGAAATGCTATAAGGTCTGAATTTCCATATGCTCATCATAGACTGTGTGCTTGGCATCTTTTAAGGAATGCCACCAGCAACATTAGCAATCCACGGTTCACTTCAAAGTTAAGACGTTGTATGCTTGGCGACTATGATGTGGGGAGGTTTCGCTCTAAGTGGGAAGAATTAGTTAATGAATTTGATTTGCATGGTAACCAGTGGGTAAGAGAATTGTATGATAAGAGGAAGATGTGGGCAACAACACATATTCGAGGTAACTTCTTTGCTAGTTTCCGCACTACTTCAAGGTGCGAGGGGATGCACTCTCAAGTAGGGAGGCGAGTATTGGAGAGGGCTAGAGGATTAAAGGTAGTTTCGTGTGAGCAGACTCCTAATTGCGTGATATATATTGTGTCGTCTATGAGAACAAGCCAATCACGCCAGTGGTATGTGTCCCTTGGGCCAACGGGATTACTACTAAAGTGCTCATGTCTTAGGATGGAGTCAATGGGAATTCCTTGTGAACATGTTTGCAAGTTGGATGGTAAAAGTGGAGCTAACCTTGATTTGTCAAAACAAGTTGTTAGGGAACTGCTGGAGAAATTAAGGGAATCAGGTAGTTCACCGAGAAGAGATGCTGAGAATGTAAATGATGGTGTAGGTGGTGATAGGAGCGTGCGGGATCCAAAGCGTGTGAGGACCAAAGGGTGTGAGTCACGACCATTGTCAGGGGGTGCTCAAGGCAATAGAAGAACTGCATGTTTTAGTATTTGCCAGGGACCCGGACACAACAAGAAGACTTGTCCTCTTCGAAAAGCCTAG 1581 0.4231 MDDSMVWSGNNGDEGRNAEGLGSVPLHNEDTVDNDEANIPINEDYNDYSNANSSENEDVDIYKIDDEIDLKRIELISLSESDLKKFHFSSLKMGFQFYNDYAQKRGFAARKWNIVKNKMGEITQQTFVCFKEGYRQKKHIKRTNRKRKPRAMTSHDMLSQQHVGMLPAHRKMDECDLIQMNNMRDAGIGVTQIYGLAANQSGGYERMAFRKRDMYNEIERQKRIQVSDVRAVFAYLRELQAAMRGKLPSSVITDGDLAMRNAIRSEFPYAHHRLCAWHLLRNATSNISNPRFTSKLRRCMLGDYDVGRFRSKWEELVNEFDLHGNQWVRELYDKRKMWATTHIRGNFFASFRTTSRCEGMHSQVGRRVLERARGLKVVSCEQTPNCVIYIVSSMRTSQSRQWYVSLGPTGLLLKCSCLRMESMGIPCEHVCKLDGKSGANLDLSKQVVRELLEKLRESGSSPRRDAENVNDGVGGDRSVRDPKRVRTKGCESRPLSGGAQGNRRTACFSICQGPGHNKKTCPLRKA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi776g00019 526 Pfam MULE transposase domain 231 282 IPR018289 -
Sebi776g00019 526 MobiDBLite consensus disorder prediction 1 52 - -
Sebi776g00019 526 Coils Coil 523 526 - -
Sebi776g00019 526 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 433 IPR031052 GO:0006355
Sebi776g00019 526 MobiDBLite consensus disorder prediction 455 490 - -
Sebi776g00019 526 MobiDBLite consensus disorder prediction 455 501 - -
Sebi776g00019 526 Pfam FAR1 DNA-binding domain 96 151 IPR004330 -
Sebi776g00019 526 ProSiteProfiles Zinc finger SWIM-type profile. 402 438 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi776g00019 Sebi-Chr776 395049 397465 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi776g00019 MULE 2.7e-10 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi776g00019 - - ahf:112728364 281.567