Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi776g00001 ATGAAAGAGGGTGGTAGGAAACAGGGTGCACCCTCACCCTGTGCTGCATGCAAGCTCCTCCGCAGAAGGTGTGCTCAAGATTGTGTTTTTGCCCCTTATTTCCCAGCGGATGAGCCCCAGAAGTTTGCAAATGTGCACAAAGTGTTTGGTGCTAGTAATGTCAACAAGATGCTTCAGATATCCAATTCTTAA 192 0.474 MKEGGRKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQISNS 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi776g00001 63 ProSiteProfiles LOB domain profile. 12 63 IPR004883 -
Sebi776g00001 63 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 59 - -
Sebi776g00001 63 Pfam Lateral organ boundaries (LOB) domain 13 59 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi776g00001 Sebi-Chr776 102786 103098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi776g00001 1 59 AS2 family AT1G31320 91.525 2.57e-36 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi776g00001 LOB 6.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi776g00001 - K01598 gmx:100802822 127.487