Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi775g00016 ATGTCGTGTGAGGAGTCACAGAAAAAGATGGTGTTTGACGCGGAAACGGCGTCGTCGTTGGTGAAGGAACTGAGGAGCAGTTTCGCTTCTGGCACGACGCGAAGTTATGAATGGAGAGTGTCGCAAGTGAAAGCCCTTTTGAAGATGGTAACTGAAAATGAAGAGCAGATCATCGATGCTCTTCGTTCAGACCTCGAAAGGCCTCCACTGGAAACTGTAGTCTATGAGATTGGTATGTTTAAAAACTCATGTGAAGTCACACTGAAGGAATTGAAACATTGGATGATGCCAGAAAAGGTTAAAACTTCAATCACAACTTTTCCCTCTTCAGCTGAAATAGTACCTGAACCGCTGGGTGTGGTGTTAGTCATCTCTGCATGGAACTATCCATTCTTGTTGTCTCTTGATCCAGTTGTTGGAGCTATAGCAGCTGGTAATGCTGTGGTTCTAAAGCCTTCAGAAATTGCTCCAGCCTCATCTTCACTGCTGGCAAAATTGATAGGGAAGTACATGGATAACTCATCTGTAAGAGTAGTAGAGGGGGCAGTTGATGAAACAACCGCACTATTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAGAGTGGGACGTATAGTGATGGCTGCTGCTGCAAAACATCTTACACCAGTTGTTCTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATCAATTTACAGGTAGCAGCTAGAAGGATTATTTCAGGCAAGTGGGGGTGTAACAATGGACAAGCCTGCATTTCTCCAGATTATGTTATAACAACAAAAGACAATGCTCCCAAGTTGGTGGATGCCCTAAAGATTGAATTGGAGAATTGTTATGGGAAGAACCCAATGGAATCAAAAGATTTGTCCCGCATTGTGAATTCCAATCACTTTGCTCGCTTGACAAAGTTATTGGATGATGATAAGGTTGCTGGCAAGATTGTTCATGGAGGTGAAAGGGATGAAAGCAAATTGAAGATTGCTCCAACTATTTTATTGGATGTTCCACGAGATTCTCTGATAATGGGAGAGGAGATCTTTGGTCCATTGCTTCCCATCATCACGGTCAATAAACTGGAAGAAAGCTTCGATGTGATCAATTCAGGAACAAAGCCTCTCGCTGCATATTTATTTACAAACGATGAGAAGTTCAAGGAGCGGTTTGTAATGACTGTTTCTGCTGGGGGTTTGCTTGTCAATGACACTGTCTTACATCTTGTGGTTCATACTTTGCCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTGCATACCATGGGAAATTCTCCTTTGATGCTTTTACTCACAAAAAAGCAGTTCTTTATCGAAGTTTTATGGGTGATGCATCAATAAGGTACCCACCATACACGGATACAAAGCAGAGATTGATGAGGGCTCTCGTTGGTGGTGATATTCCTGGCATAACTCGTGCTCTCTTTGGTTGGTCTTAG 1470 0.4286 MSCEESQKKMVFDAETASSLVKELRSSFASGTTRSYEWRVSQVKALLKMVTENEEQIIDALRSDLERPPLETVVYEIGMFKNSCEVTLKELKHWMMPEKVKTSITTFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLAKLIGKYMDNSSVRVVEGAVDETTALLQQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARRIISGKWGCNNGQACISPDYVITTKDNAPKLVDALKIELENCYGKNPMESKDLSRIVNSNHFARLTKLLDDDKVAGKIVHGGERDESKLKIAPTILLDVPRDSLIMGEEIFGPLLPIITVNKLEESFDVINSGTKPLAAYLFTNDEKFKERFVMTVSAGGLLVNDTVLHLVVHTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFMGDASIRYPPYTDTKQRLMRALVGGDIPGITRALFGWS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi775g00016 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 226 426 IPR016163 GO:0016620
Sebi775g00016 489 FunFam Aldehyde dehydrogenase 25 229 - -
Sebi775g00016 489 PIRSF ALDH 4 483 IPR012394 GO:0006081
Sebi775g00016 489 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 222 229 IPR029510 GO:0016491
Sebi775g00016 489 FunFam Aldehyde dehydrogenase 226 426 - -
Sebi775g00016 489 SUPERFAMILY ALDH-like 20 459 IPR016161 GO:0016491
Sebi775g00016 489 PANTHER ALDEHYDE DEHYDROGENASE 16 478 IPR012394 GO:0006081
Sebi775g00016 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 444 IPR016162 GO:0016491
Sebi775g00016 489 CDD ALDH_F3FHI 17 448 - -
Sebi775g00016 489 Pfam Aldehyde dehydrogenase family 13 446 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi775g00016 Sebi-Chr775 306479 311213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi775g00016 77 487 Aldehyde Dehydrogenase Gene Family AT1G44170 72.993 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi775g00016 K00128 - gmx:100783726 837.795