Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi775g00001 ATGATGCCAAACGTGATAGCATATGCTAAAGATGTGGTCGAGAATCGTTGTTCCGTTTTCCGCACTGAAAATGGGAACTTTCATTTATTCAACTTGGTTTTGAATATTATAATTCAAAAGATATTTGACGAACCGGGTGATGATATTATCAACATGGTCATGGAGGAGTCCATGAGAGAGACCCAAATGGTTCCTGCATCCAAGATTGCCATTGAATCCCTCCAAAAAGTGAAGCTACAAGAAGGTGTTACCATGGAGAGATGTAGTATTTGTCTAGTGGAGTTCGATGATGGCATAGAGGTTTCATCAATGCCTTGCAAGCATGTTTATCACCATGAATGCCTTGTTCAGTGGCTTAAAACGAGTCATGTGTGTCCTTTGTGTCGCTATCCTATGCCTACTTCAATAAGTGATTAA 417 0.4005 MMPNVIAYAKDVVENRCSVFRTENGNFHLFNLVLNIIIQKIFDEPGDDIINMVMEESMRETQMVPASKIAIESLQKVKLQEGVTMERCSICLVEFDDGIEVSSMPCKHVYHHECLVQWLKTSHVCPLCRYPMPTSISD 138
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi775g00001 138 ProSiteProfiles Zinc finger RING-type profile. 88 129 IPR001841 -
Sebi775g00001 138 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 135 IPR013083 -
Sebi775g00001 138 SMART ring_2 88 128 IPR001841 -
Sebi775g00001 138 SUPERFAMILY RING/U-box 71 135 - -
Sebi775g00001 138 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 49 133 - -
Sebi775g00001 138 Pfam Ring finger domain 87 129 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi775g00001 Sebi-Chr775 23193 23609 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi775g00001 48 133 C3H Transcription Factor Family AT1G18760 40.000 1.47e-20 82.0
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi775g00001 - - aprc:113870408 172.94