Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi775g00001 | ATGATGCCAAACGTGATAGCATATGCTAAAGATGTGGTCGAGAATCGTTGTTCCGTTTTCCGCACTGAAAATGGGAACTTTCATTTATTCAACTTGGTTTTGAATATTATAATTCAAAAGATATTTGACGAACCGGGTGATGATATTATCAACATGGTCATGGAGGAGTCCATGAGAGAGACCCAAATGGTTCCTGCATCCAAGATTGCCATTGAATCCCTCCAAAAAGTGAAGCTACAAGAAGGTGTTACCATGGAGAGATGTAGTATTTGTCTAGTGGAGTTCGATGATGGCATAGAGGTTTCATCAATGCCTTGCAAGCATGTTTATCACCATGAATGCCTTGTTCAGTGGCTTAAAACGAGTCATGTGTGTCCTTTGTGTCGCTATCCTATGCCTACTTCAATAAGTGATTAA | 417 | 0.4005 | MMPNVIAYAKDVVENRCSVFRTENGNFHLFNLVLNIIIQKIFDEPGDDIINMVMEESMRETQMVPASKIAIESLQKVKLQEGVTMERCSICLVEFDDGIEVSSMPCKHVYHHECLVQWLKTSHVCPLCRYPMPTSISD | 138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi775g00001 | 138 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 129 | IPR001841 | - | |
Sebi775g00001 | 138 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 51 | 135 | IPR013083 | - | |
Sebi775g00001 | 138 | SMART | ring_2 | 88 | 128 | IPR001841 | - | |
Sebi775g00001 | 138 | SUPERFAMILY | RING/U-box | 71 | 135 | - | - | |
Sebi775g00001 | 138 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 49 | 133 | - | - | |
Sebi775g00001 | 138 | Pfam | Ring finger domain | 87 | 129 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi775g00001 | Sebi-Chr775 | 23193 | 23609 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi775g00001 | 48 | 133 | C3H Transcription Factor Family | AT1G18760 | 40.000 | 1.47e-20 | 82.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi775g00001 | - | - | aprc:113870408 | 172.94 |