Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi773g00007 ATGAGAAGCTGGGGCTCATGGGTATCTGAGATTAGAGCACCAAATCAGAAAACAAGAATATGGCTTGGTTCTTATTCAACTGCAGAGGCAGCAGCCAGAGCCTATGATGCTGCACTTTTATGCCTTAAAGGTTCCTCTGCTAATCTGAACTTCCCTTTGAGTTCTTCACAGTTCATTCCTCAAGACACTTCTGTTATGTCCCCTAAATCAATCCAAAGAGTAGCTGCAGCTGCTGCTAACAGTTTTGTGGACAATGCTAGCACTAGCAATAGCATTAGTACACCACCTTCTCCTCCTCCTGCTTCAACCTCATCTTCATTGGTCTCATCCCCATCAATGTCATCATCTCCTTCAGATCAAATAGATGATGATGTTTCACTATTTTCATCACTTGGGGCCTACAATAGCTGTGATCAAGTAAATGAATCAATGGCTATGATGGAGTCTTGGTATGGATTTGATGGCCTGCAATCCCCAAAACATGTTGATCAAATGCTTAGTGGGGCTTTGTTTGATATTGATTCAACACATTTGCTTGATGATTGGTATGAAGAAAGTGACATTCCTTTGTGGAGCTTCTGCTGA 585 0.4205 MRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPLSSSQFIPQDTSVMSPKSIQRVAAAAANSFVDNASTSNSISTPPSPPPASTSSSLVSSPSMSSSPSDQIDDDVSLFSSLGAYNSCDQVNESMAMMESWYGFDGLQSPKHVDQMLSGALFDIDSTHLLDDWYEESDIPLWSFC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi773g00007 194 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 130 - -
Sebi773g00007 194 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Sebi773g00007 194 Pfam AP2 domain 2 44 IPR001471 GO:0003700|GO:0006355
Sebi773g00007 194 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Sebi773g00007 194 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Sebi773g00007 194 MobiDBLite consensus disorder prediction 87 120 - -
Sebi773g00007 194 FunFam ethylene-responsive transcription factor ERF014-like 1 54 - -
Sebi773g00007 194 MobiDBLite consensus disorder prediction 103 120 - -
Sebi773g00007 194 SUPERFAMILY DNA-binding domain 2 54 IPR016177 GO:0003677
Sebi773g00007 194 Gene3D AP2/ERF domain 1 54 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi773g00007 Sebi-Chr773 161244 161828 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi773g00007 1 193 AP2-EREBP Transcription Factor Family AT1G21910 48.780 2.14e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi773g00007 AP2 1e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi773g00007 - - gmx:100813313 254.603