Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi773g00001 ATGGATGAGAAAGCCGAGAAGAAAAGGTCTAAGATTGACAGAAGCAATTTGGCAAGTGGTTTTCATATGGATTCAAATAAAGGAAAGAAAAAGAAGCACAAGGACAGAAAGACAAAGCATGCAACTGATAAAATACTTAATTCAAATGAAACCCTTGAAGAAAATTGTACTGGTGAAGCGGCTGACAAACAATCTTGCTCTATTGAAGTGATGGATAGTAATGTAGCTGATGGTAAAGAATTGCAGTTCTTGGATGAGAACCAACAACTCAAGATGAAGAAAAGAAAGAAGTATGATGATTCATTAACTGGAAAGCAAAAATTGGGTTTTTCAATACCGAGCGAAAAAGGCAAAATGACAAAGGATAATAATGAGTTCAAAAGCAATGGAGGTGGAGATGATGACCAAGGCAAGAAGAAGAAGAAGAAACTGAGTGAAGGAGGCAAACATAAGGAGTATAATGAGTTCAAAAGCAATGAAGGTGAAGATGATGACCAAGGCAAGAAGATGAAGAAGGAGAAGAAACTGATTAGAGAAAGCAAACTTAAGAAATATAATGAGTTTAGAAATGATGAATGTGAGGATGGTGACCAAGGCAAGAAGATGAAGAAGAAACTGAGTGATGAAAGCAAAAGTAAGGAGAACAGTGTTTTTAATAGGAATGGAGATGATCCACCTTTTGCTAGGGTTGAGCCAGGAGATGCCAATGCTCGTTCTGTTGTCACTGAAGTTAATGATCAAGGCAAGGAAATGAAGAAAGAAAAGACAACTAAGGCAGGTACTGGTGAATCTCCTAACCCTGCACGTGATGGAACATCCAAACCCAAACGAGTAACTTTTTCTGATCAAGTGGATGTTTGTTGTGATGGCTTAGTGCGTGGGAAAAGGTTTACACGAGAAGAAGATGAGAAGATCAAAGCGGCTGTCATTGACTATATAGAGTTTCATGGTTTGGGAGACGAAGGTCTAGATATGGTTCTCCATTGCAAGAAACATCCTGAAGTTAGGGATTGTTGGAAGGAAATTGGAGAAGCCTTACCTAATAGACCTCAAGTAAGTGTGTATTATCGTGCTCATATTTTGTTTGAAAGGGATGAGAGGCGTAAGTGGACTCGTGATGAGCTTGAATTTGTACAGAAGGTCCAGGAACAACATGGATCTGATTGGAAATTGGTAGCTGAAGCTTTGGATAAAAGTCGAGTTCATGTAAAGGATGCATGGCGTAGAATAAAATTAACCAATATAAAAAGAGGACGGTGGACACAAGAGGAGATTCAAAATTTATTTGATTTAGTAAATCTGGATCTATGTGCGAGGGCTTCAGAAGGCTATAGAAAATCAAAACATGGTATGTTGCGAGATAATATTAGTTGGGAGGCAATTGGTAGCAAATTGGCCACTAGAACCAGTCAAGTGTGCTGCAAAAAGTGGTATGAGAAATTAGCACCACCTATGGTTTCTAAGGGTGAGTGGTCGGACACTGATGACTACCGTTTGGTTACTGCTTTATATGTTTTGGATGCTTGCTGCATGGAGGAGGTAGACTGGGAAAGTCTGCTTGAGCATAGGTCTGGTGATATATGCAGAAAACGATGGAACCAAATGGTCCAACAAATTGGAGAGTATGGAGGGAAGCCATTTGCTGAGCAGGTTGAAATTCTTTCCAAGAGATATTCCCCTGACTTATTGGAAGCAAGAGAGGCCTTTGATAACAAACCTGTGGTTTGTTGA 1731 0.3957 MDEKAEKKRSKIDRSNLASGFHMDSNKGKKKKHKDRKTKHATDKILNSNETLEENCTGEAADKQSCSIEVMDSNVADGKELQFLDENQQLKMKKRKKYDDSLTGKQKLGFSIPSEKGKMTKDNNEFKSNGGGDDDQGKKKKKKLSEGGKHKEYNEFKSNEGEDDDQGKKMKKEKKLIRESKLKKYNEFRNDECEDGDQGKKMKKKLSDESKSKENSVFNRNGDDPPFARVEPGDANARSVVTEVNDQGKEMKKEKTTKAGTGESPNPARDGTSKPKRVTFSDQVDVCCDGLVRGKRFTREEDEKIKAAVIDYIEFHGLGDEGLDMVLHCKKHPEVRDCWKEIGEALPNRPQVSVYYRAHILFERDERRKWTRDELEFVQKVQEQHGSDWKLVAEALDKSRVHVKDAWRRIKLTNIKRGRWTQEEIQNLFDLVNLDLCARASEGYRKSKHGMLRDNISWEAIGSKLATRTSQVCCKKWYEKLAPPMVSKGEWSDTDDYRLVTALYVLDACCMEEVDWESLLEHRSGDICRKRWNQMVQQIGEYGGKPFAEQVEILSKRYSPDLLEAREAFDNKPVVC 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi773g00001 576 SUPERFAMILY Homeodomain-like 461 538 IPR009057 -
Sebi773g00001 576 MobiDBLite consensus disorder prediction 1 15 - -
Sebi773g00001 576 PANTHER GB|AAC33480.1 19 575 - -
Sebi773g00001 576 MobiDBLite consensus disorder prediction 118 218 - -
Sebi773g00001 576 MobiDBLite consensus disorder prediction 48 63 - -
Sebi773g00001 576 MobiDBLite consensus disorder prediction 245 259 - -
Sebi773g00001 576 Gene3D - 371 409 - -
Sebi773g00001 576 MobiDBLite consensus disorder prediction 92 276 - -
Sebi773g00001 576 ProSiteProfiles Myb-like domain profile. 362 411 IPR001005 -
Sebi773g00001 576 MobiDBLite consensus disorder prediction 1 63 - -
Sebi773g00001 576 SMART sant 487 538 IPR001005 -
Sebi773g00001 576 SMART sant 366 413 IPR001005 -
Sebi773g00001 576 SMART sant 416 483 IPR001005 -
Sebi773g00001 576 SMART sant 293 364 IPR001005 -
Sebi773g00001 576 CDD SANT 419 481 IPR001005 -
Sebi773g00001 576 Gene3D - 410 485 - -
Sebi773g00001 576 ProSiteProfiles Myb-like domain profile. 412 481 IPR001005 -
Sebi773g00001 576 Pfam Myb-like DNA-binding domain 370 428 - -
Sebi773g00001 576 ProSiteProfiles Myb-like domain profile. 483 536 IPR001005 -
Sebi773g00001 576 SUPERFAMILY Homeodomain-like 367 426 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi773g00001 Sebi-Chr773 35215 36945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi773g00001 364 538 MYB Transcription Factor Family AT4G32730 25.000 1.45e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi773g00001 Myb_DNA-bind_6 1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi773g00001 - - aprc:113872850 640.958