Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi772g00026 ATGGAAAAAGGTTTTGAGGAATTGTCAAACGGTGATGGTAATAGTGGTACCAATGAAGTATGTGGTGGTGTTGAGGCATGTGAGGGACCTAAAAATGTTACTGAGTTGACAGTTGATGAGATTATGTCTCTTGAATTTGATTTAGAGGAAGATGCTTTTAATTTTGATAGTAATTATGCTAAAGTAGTTGGGTTTTCAGTAAGAAAAGATGACGTCTATCATGATGATTGGTATGGGATTGTTATGAGAAACATGGTATGTAATAGGCAAGGAGAGAGGTCTGAGAAGAACATGCAAAGGAAGGACAGGTGTCGTGAACCAAAGGCCATTACCCGCACACGTTGCCAAGCAAGGCTCCGTGTTCGTTTAGGTTACTTGAGTGGAAAATGGACAGTTACTCATTTTGAGCCCAATCATAATCACGAGTTGACCCCATCAACATATGTCCATTTGATTTCTGCATATAGAGGTCTTTCTGAGGGTGATAAGGCTCAAGTGAATAGTTTGCACATGTTGTGCTATTGGCATCTTCATCAGAATGCATGCGAGAATGTGAAGATTCCTAAGTTTCTAGAGGAATTTAAGACATTACTTTACATTAACATTGGACCTGATGAGTTTGAAATGAAGTGGAGCAGTTTAGTTGAAAAGTATGGTGTTTCTAATAATAGGGCGGTTAAAGAATATAGACACAATGAGTTGATGTCTGATTTTAAGACTAAGTTTTCTGATCCTGTTCTGAGTACATCTCTGTATAAATCGGAAGTTAATAACAAAGTGAGGGTGAAGATAAACAAGTTTGGAAGTGCTTGTTTTGAGTATGTGGTGATATATGACAAAGATAAAGGGGTTTTCGCTTGTGACTGTCATCTATTTGAGTCTTGTGGCATTCCGTGCTCTCACATCTTTTGTACAATGAAAAATGAGAGTATAGAGGTGATACCTGAATCTTTGATATGCAAGAGATGGACGAAGGCAGCCAAGGATGAATTTATTTCTGAAATAAGTGTTGAAGAGAATGATTCTAGTAAGTTGGATCTGTTGAGGACTGGTGCTATTGCAGATGCATGTAATAGGCTTTTTAGAGCTACTTGTAAGTATCTGGGAAATTATCCTGTAAATATTGATTCAATTGACAAGTTGACTGCTGAGATTGAAAAAAAAAAAAGAAGTTCAGTTAAGAACCGCAACAAAGGATCCAATGTGATTGGAGGAAAATAA 1221 0.3735 MEKGFEELSNGDGNSGTNEVCGGVEACEGPKNVTELTVDEIMSLEFDLEEDAFNFDSNYAKVVGFSVRKDDVYHDDWYGIVMRNMVCNRQGERSEKNMQRKDRCREPKAITRTRCQARLRVRLGYLSGKWTVTHFEPNHNHELTPSTYVHLISAYRGLSEGDKAQVNSLHMLCYWHLHQNACENVKIPKFLEEFKTLLYINIGPDEFEMKWSSLVEKYGVSNNRAVKEYRHNELMSDFKTKFSDPVLSTSLYKSEVNNKVRVKINKFGSACFEYVVIYDKDKGVFACDCHLFESCGIPCSHIFCTMKNESIEVIPESLICKRWTKAAKDEFISEISVEENDSSKLDLLRTGAIADACNRLFRATCKYLGNYPVNIDSIDKLTAEIEKKKRSSVKNRNKGSNVIGGK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi772g00026 406 ProSiteProfiles Zinc finger SWIM-type profile. 274 310 IPR007527 GO:0008270
Sebi772g00026 406 MobiDBLite consensus disorder prediction 1 21 - -
Sebi772g00026 406 Pfam FAR1 DNA-binding domain 55 144 IPR004330 -
Sebi772g00026 406 PANTHER OS01G0519700 PROTEIN 40 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi772g00026 Sebi-Chr772 356497 358526 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi772g00026 FAR1 4.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi772g00026 - - vvo:131662316 191.045