Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi772g00012 ATGCAGGTTCACAGAGTTATAGGACTGGCCAAGATTATGATGGAGTTACCAGATATTTGGATATTGAGATTGGCTGTGGCATGTGCACTTTGTCTGTATATATTTCTCAGATCAGCTTCTGCCTCTGAAGAGTTTGAGAGCATAGCATGCTGTGCTGATTCAAATTACACAGATCCGCAGACCACCTTAAATTATACAACAGATTACAGCTGGTTCTCTGATAAAAGAAGTTGCAGACAAATACCCGAAACTGGGTTAAACAATAGAAGCAATGAAAATGTTCGACTGTTTGATATAGATGAGGGAAAGAGATGGGTTACACAATTAGGTGCAGTGAGATCATCTAGGCTCCAGGGCTTGGAAATTGAGGGGGTTTTCAGAGCCACCAAAAACTACATAGACTTCTGCTTAGTGAAGGGGGAGATTAATCCCTTTATTTCTCAGATTGAATTAAGGCCATTACCAGAAGAGTACCTACATGATTTGCCTACCAGTGTTTTAAAACTGATAAGCAGAAATAATCTTGGGGACTCGAAAGATGACATCAGGTTCCCAGTTGACCGAAGTGATAGAATCTGGAAAGCAACTTCAAGTCCATATTCTGCTTTTCCACTGTCTTTCAATGTCAGCAATGTTGACCTCCAAGCTAATGTGACACCACCTCTACAAGTCCTACAAACAGCTCTTACCCACCCTGAGCGCTTGGAGTTCATCCACAATGGCCTTGAGACTGAGGATTATGGATACCGTGTGTTTCTCTACTTCCTTGAAATAAATAGAACTCTCAAAGCAGGCCAAAGGGTGTTTGACATCTATGTTAACAGTGAGATTAAAAAGGAGAAATTTGATGTATTGGCTGGAGGGTCCAACTATGGATACACTGTCTTGAACGTTTCAGCAAATGGATCACTTAATGTAACCTTGGTCAAGGCATCTGATTCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCCTACAGGTCCGATCATGGGTTGAAGAGACCAACCAAACAGACGTGGAAGTGATTCAGAAGATGAGAGAAGAACTATTGCTGCAAAACCAAGACAATAAAGCGCTGGAAAGTTGGACTGGAGACCCTTGTATACTTTTCCCCTGGCAAGGAATAGCATGTGATGGTTCAAATGGTTCAACAGTTATAACTAAGCTGGATCTTTCTTTGAGTAATCTCAAAGGACCAATTCCTTCCAGTGTCACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAACAGTTTCGATGGTCATATCCCCTCATTTCCGCTGTCATCCTTGTTGATATCAATAGATCTGAGCTATAATGATCTTACGGGAACACTTCCAGAATCGATTACTTCACTGCTACATTTAAAATCATTATATTTTGGCTGCAACCAACACATGAGCGAAGAGGATCCAGCAAATTTAAACAGTTCACTAATCAATACAGATTACGGAAGATGCAAATCAAAAGAACACAAATTTGGACAAGGAATCGTTATTGGAGCTATTACATGCGGATCACTTTTGGTTACTTTGGCTGTTGGAATTCTTTTTGTTTGCCGCTACAGACAAAAACTACTTCCATGGGAAGGTTTTGGTGGAAAGAACTACCCAATGGCAACAAATGTAATTTTCTCTTTGCCAAGCAAAGATGATTTCTTCATAAAGTCTGTATCAATTCAGACATTCACTTTGGAGTATATAGAAGTAGCCACAGAGAGGTACAAAACTTTGATAGGTGAAGGAGGGTTTGGCTCTGTTTATCGGGGCATTCTAAATGATGGTCAAGAGGTGGCAGTAAAAGTCCGGTCAGCCACATCCACTCAAGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAATACAGCATGAGAACCTGGTTCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTTGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGATTATATGGGGAACCAGCAAAGAGAAAAGTATTAGACTGGCCAACTAGACTATCTATTGCTCTTGGTGCAGCTCGAGGCAATGAACAAGATGAAGCAGGACGTCCTGTAATACACAGGGATGTGAAATCAAGCAATATACTTCTGGATCATAGCATGTGTGCCAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCACAGGAAGGAGACAGTAACGTTTCCCTTGAAGTAAGAGGAACCGCAGGATACCTGGATCCTGAGTACTACAAAACCCAGCAATTATCTGAAAAGAGTGATGTCTTCAGCTTTGGCGTGGTTCTGCTTGAAATTGTGAGTGGACGGGAACCTCTCAACATACAGGGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGAGCCTCAAAGGTGGAAGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAAGCAATGTGGAGAGTAGTGGAAGTAGCACTGCAATGTCTTGAACCCTTCTCAGCATATAGACCATGCATGGTTGACATTGTCCGTGAGTTGGAGGATGCTCTCATTATAGAAAACAATGCATCTGAATACATGAAGTCCATAGATAGCCTTGGAGGATCCAACCGCTACTCCATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTACATCTACAGCGGAATCAACCATCACAACCCAATCCTTGTCCCACCCACAGCCGAGATAG 2709 0.4179 MQVHRVIGLAKIMMELPDIWILRLAVACALCLYIFLRSASASEEFESIACCADSNYTDPQTTLNYTTDYSWFSDKRSCRQIPETGLNNRSNENVRLFDIDEGKRWVTQLGAVRSSRLQGLEIEGVFRATKNYIDFCLVKGEINPFISQIELRPLPEEYLHDLPTSVLKLISRNNLGDSKDDIRFPVDRSDRIWKATSSPYSAFPLSFNVSNVDLQANVTPPLQVLQTALTHPERLEFIHNGLETEDYGYRVFLYFLEINRTLKAGQRVFDIYVNSEIKKEKFDVLAGGSNYGYTVLNVSANGSLNVTLVKASDSEFGPLLNAYEILQVRSWVEETNQTDVEVIQKMREELLLQNQDNKALESWTGDPCILFPWQGIACDGSNGSTVITKLDLSLSNLKGPIPSSVTEMTNLKILNLSHNSFDGHIPSFPLSSLLISIDLSYNDLTGTLPESITSLLHLKSLYFGCNQHMSEEDPANLNSSLINTDYGRCKSKEHKFGQGIVIGAITCGSLLVTLAVGILFVCRYRQKLLPWEGFGGKNYPMATNVIFSLPSKDDFFIKSVSIQTFTLEYIEVATERYKTLIGEGGFGSVYRGILNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSIALGAARGNEQDEAGRPVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIQGPRNEWSLVEWAKPYIRASKVEEIVDPGIKGGYHAEAMWRVVEVALQCLEPFSAYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTTSTAESTITTQSLSHPQPR 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi772g00012 902 FunFam Nodulation receptor kinase 543 650 - -
Sebi772g00012 902 FunFam Leucine-rich repeat receptor-like kinase 339 458 - -
Sebi772g00012 902 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 651 858 - -
Sebi772g00012 902 Pfam Protein tyrosine and serine/threonine kinase 579 845 IPR001245 GO:0004672|GO:0006468
Sebi772g00012 902 PANTHER OS07G0107800 PROTEIN-RELATED 97 849 - -
Sebi772g00012 902 Gene3D Ribonuclease Inhibitor 337 493 IPR032675 -
Sebi772g00012 902 SUPERFAMILY Protein kinase-like (PK-like) 555 845 IPR011009 -
Sebi772g00012 902 CDD STKc_IRAK 581 846 - -
Sebi772g00012 902 ProSiteProfiles Protein kinase domain profile. 575 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi772g00012 902 Gene3D Transferase(Phosphotransferase) domain 1 651 862 - -
Sebi772g00012 902 SMART serkin_6 575 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi772g00012 902 Gene3D - 168 329 - -
Sebi772g00012 902 ProSitePatterns Protein kinases ATP-binding region signature. 581 603 IPR017441 GO:0005524
Sebi772g00012 902 SUPERFAMILY L domain-like 357 477 - -
Sebi772g00012 902 Pfam Malectin-like domain 97 328 IPR024788 -
Sebi772g00012 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Sebi772g00012 902 Gene3D Phosphorylase Kinase; domain 1 548 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi772g00012 Sebi-Chr772 245790 253389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi772g00012 22 852 Receptor kinase-like Gene Family AT1G67720 33.848 8.39e-122 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi772g00012 PK_Tyr_Ser-Thr 8.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi772g00012 - - gmx:100781986 1467.21