Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi772g00011 ATGACTCATCAAGCCAATGGCTATCCTCTTGAAACAGTGATTGACATAAAGAAACCAGTGAATTTCACTGGGGGTCTTCAGTTTGAATGCCTTACATACACTGTCACAAAGAAGCAGAAGGTTGATGGGAAGTGGTCAAGTGAAGAGGTGGACTTGCTGCATGACATCACTGGTTATGCACCAAAGGGTTGCATCACTGCAGTGATGGGTCCTAGTGGTGCAGGAAAGTCCACTTTTTTGGATGGTCTTGCTGGCAGAATTGCAAGTGGAAGTCTTAAAGGAAGGGTTTCCTTAGATGGGGTAACTGTGAGTGCAAGCTTGATCAAAAGAACTTCAGCATATATCATGCAGGATGATAGGCTTTTTCCAATGCTTACTGTCTATGAAACTTTCATGTTTGCTGCTGATTTCCGCTTGGGCCCACTTTCTCTTGCTGATAAGAAGCAGAGGGTAGAAAAATTGATTGAGCAGCTTGGCTTATCATCATCTCGGAACACCTACATAGGAGATGAAGGGACTAGAGGAGTGTCTGGTGGAGAACGTAGAAGGGTCTCAATTGGTGTGGACATCATCCATGGACCTTCACTTCTGTTTCTAGATGAACCAACTTCAGGTCTAGACTCCACCAGTGCTCACAGTGTGATTGAAAAGGTACATGACATAGCACGAAGTGGCAGCACTGTGATTCTCACCATCCACCAGCCCTCATCAAGAATCCTATTGCTCCTTGACCATCTCATCATCCTTGCTAGAGGGCAGCTCATGTTTCAAGGATCACCTAAAGATGTAAGTCTTCATTTGAGTCGCATGTCACGCAAAGTCCCCAAAGGTGAGAGCCCAATTGAGCACCTCATTGATGTGATCCAAGAGTATGATCAGTCTGAGGTTGGAGTTGAGGTACTAGCTGAGTTTGCACGCACAGGGATGAAACCCCCTCCTCTGTCTGGCAAGGAGATGTTACTGTCTTCAGTTGCACCTTCACCATCCCCATCTTTACATAGAGGACACCCTGCATATGAGGGAAAATCTCAAGACTTCTCTTACTCATCACAAGTAAGTAGGAGGATCATAGATGATTTTGATCACAGTGTTAGAAGTCCATATAATAATACATCAATCTCATGGAGTGCCAGTCATAGTGCAGCTTTTTTAAAATTCACACCTTCACGGCTTAGAAATGATAACAAGGTGCAAAAACCAACAAGCCATGCTTCCCCTGGCTACTACACATACTCTAGTGAAATCCTCCCAGCCACTCCAACACCACATAGCAGTGACTACACAGTGAATGAGAATGACTACCTCACTCCCTCAAATGCTACACCAGAACATCTTGGCCCAAAGTTTGCAAATTCATACATAGGAGAGACTTGGATCCTCATGCGCCGTAACTTCATAAACATCAGGCGTACCCCTGAACTTTTTCTATCAAGATTGATGGTTCTCACCTTCATGGGCTTCATGATGGCCACAATGTTCCACAACCCCAAAGAAACCTTGCAAGGAATCACAAACCGTCTCAGTTTCTTCATCTTCACAGTGTGCCTCTTTTTCTTCTCTTCCAATGATGCTGTTCCAGCTTTCATCCAAGAAAGGTTCATTTTCATCAGGGAAACTTCTCACAATGCCTATAGAGCTTCCTCCTACACCATTGCTAGCCTAATCACTCACATGCCATTTCTTGCTCTCCAAGCTTCAGCCTATGCAGGCATTGTTTGGTTTGCTCTAAAGCTTCGAGGCCCTTTTGTGTACTTCTTGCTTATTCTCTTTGTTTCTCTTCTGTCAACCAATTCATTTGTTGTGTTTGTGAGCTCAGTGGTTCCAAATTACATCTTGGGTTATGCTGCAGTGATTGCCTTCACTGCCCTTTTCTTCTTGTTTTGTGGATACTTCTTGAGCAGCAATGACATTCCCATTTACTGGCGTTGGATGAACAAAATTTCAACAATGACATACCCTTATGAGGGGCTTTTGATGAATCAGTTTCAGACCAATCATAGCTTTGGGACAAATGATGATGAACCTGTTACTGGTTTTGATATCTTGAAGAGTCTTCATATTGGGACTGATGGACACAGGAAGAGGAACATTGTACTAATAATGTTAGGAACTCTTGGATCTGTTTCTTCATTGTATGTGTACTTGCTTGGACGTTGTACCTCTCAGGCTCTCACTAAACAAAGGGGGATAGAGGAAGCATTTTGA 2205 0.4358 MTHQANGYPLETVIDIKKPVNFTGGLQFECLTYTVTKKQKVDGKWSSEEVDLLHDITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIASGSLKGRVSLDGVTVSASLIKRTSAYIMQDDRLFPMLTVYETFMFAADFRLGPLSLADKKQRVEKLIEQLGLSSSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRILLLLDHLIILARGQLMFQGSPKDVSLHLSRMSRKVPKGESPIEHLIDVIQEYDQSEVGVEVLAEFARTGMKPPPLSGKEMLLSSVAPSPSPSLHRGHPAYEGKSQDFSYSSQVSRRIIDDFDHSVRSPYNNTSISWSASHSAAFLKFTPSRLRNDNKVQKPTSHASPGYYTYSSEILPATPTPHSSDYTVNENDYLTPSNATPEHLGPKFANSYIGETWILMRRNFINIRRTPELFLSRLMVLTFMGFMMATMFHNPKETLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIASLITHMPFLALQASAYAGIVWFALKLRGPFVYFLLILFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSNDIPIYWRWMNKISTMTYPYEGLLMNQFQTNHSFGTNDDEPVTGFDILKSLHIGTDGHRKRNIVLIMLGTLGSVSSLYVYLLGRCTSQALTKQRGIEEAF 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi772g00011 734 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 264 IPR027417 -
Sebi772g00011 734 MobiDBLite consensus disorder prediction 320 347 - -
Sebi772g00011 734 FunFam ABC transporter G family member 6 36 274 - -
Sebi772g00011 734 Pfam ABC-2 type transporter 457 662 IPR013525 GO:0016020|GO:0140359
Sebi772g00011 734 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524|GO:0016887
Sebi772g00011 734 Pfam ABC transporter 53 204 IPR003439 GO:0005524
Sebi772g00011 734 Gene3D - 38 273 IPR027417 -
Sebi772g00011 734 SMART AAA_5 62 260 IPR003593 GO:0016887
Sebi772g00011 734 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 678 - -
Sebi772g00011 734 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 26 276 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi772g00011 Sebi-Chr772 235730 239508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi772g00011 13 290 Calmodulin-binding Proteins AT2G36910 26.056 2.96e-10 62.0