Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi76g00110 ATGGCAGGGGTGTATGATTTGATCAAGGAAGTGTATCCAGGGCGTCAGAACTGGAGGTTGAAGGCAAGAATCATCAGGCTGTGGGAGATGTGTCCAATGGAGCAGCCAGGCAATCCCTTTGCAATTAAAATGGTCATGATTGATGCCAGGGCGGGAAGCTCCAAGCTACCATTCGGGTTCCAATCCCCATGTATGGCTTTGTCACTGATGACAACCGAGGACATTAAGAACACCGGAGGGCGGTCTGACTATCTCATAGATTTCATGGGGATATTGTTTGCTGTATCATCTGAGAAGACGTCTGATAGGAGTGGGCGAACAACCAGGTTTATAGTGATGGAGTTGAACGATGATAAGGGGATGATACGCTGCACTATGTTTGGGGAATATGTGGATGCAATCAATGTGCATCTTGCTGAGGCAGGGGATGAGTTGCCTGTTGTTGTGGTGCAGCTTGGTCGTGTCAAGACCTACAAGGGTGATATAACAATCCAAAATGTGGTTAACACCACCAAGATAATTTTGAACCCTAACATCCCAGAGGTGCAGACCTTCAAGAATAGGCTCACACTTAATGGGTTTGAGATTGAAGCTTCCATTGGGGAGATAGGTGAAGGTTACAAGGAATTGCCCTTGAAGGATGATTTCTTGGGGTTTTTTTTTCCAAGGAAGACAATCCTGAAGCTGCATGTTACAGAAGAGTTTTTACTTGCAGGAGGGCAACTTCATAACTTCATTGTGTTGGGAACCATTGCTGCTGTTCTGAAGGATGATCAGTGGTGGTATTATGCATGTCGTTGCATGAAGGCCGTAAACGAGGATGGTGGGGAGTATTTCTGTCCAGCTTGCTGCATCAATGTTGATCATGTGACACCAAGCCTATTGTCATGTGCTGATCTTTTGGCCGAGGCTAAGGTGGGTTTTGTTGAGACGTTTGGGGCTAAGCGTTCAGACCCTGAGTTTGGTGACCATCCTCCAGAGTTTGGGTCAATTGTGGGGCGAGAATTGCTATTTAAAGTTGATAAGGGTTCCGGGCATGCCTTTAGGTTCGATGACACCTTTAGGGTGAGAAGGATATGTGATGACCCATCGATCATTGGGATCTTCAAGGACAATTCGGTCGTGAAGACTCCTGAGAAGAGCGTGTTTATCCCACCTTTTCCTAATCTGGATGGGGCTAGCTCAAATGGTGTGGGGAGGGTTGAGGTTCATGAGGTTGTCGATGTAAGTTGTGAGCTGGATCCCGAGTCTTTGAACCTTGAGGAAATCACGATTGAAAATAAAGGTGATGGTCACCAGGAGAAAATACAGGCCGGGGAAACCAACCTGAAGAAGAAGAAGAAAAATCTAAGGTTGAAGAAGGTCAAGATCGAACGTGACTGA 1383 0.4635 MAGVYDLIKEVYPGRQNWRLKARIIRLWEMCPMEQPGNPFAIKMVMIDARAGSSKLPFGFQSPCMALSLMTTEDIKNTGGRSDYLIDFMGILFAVSSEKTSDRSGRTTRFIVMELNDDKGMIRCTMFGEYVDAINVHLAEAGDELPVVVVQLGRVKTYKGDITIQNVVNTTKIILNPNIPEVQTFKNRLTLNGFEIEASIGEIGEGYKELPLKDDFLGFFFPRKTILKLHVTEEFLLAGGQLHNFIVLGTIAAVLKDDQWWYYACRCMKAVNEDGGEYFCPACCINVDHVTPSLLSCADLLAEAKVGFVETFGAKRSDPEFGDHPPEFGSIVGRELLFKVDKGSGHAFRFDDTFRVRRICDDPSIIGIFKDNSVVKTPEKSVFIPPFPNLDGASSNGVGRVEVHEVVDVSCELDPESLNLEEITIENKGDGHQEKIQAGETNLKKKKKNLRLKKVKIERD 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi76g00110 460 SUPERFAMILY Nucleic acid-binding proteins 222 295 IPR012340 -
Sebi76g00110 460 Gene3D - 221 348 IPR012340 -
Sebi76g00110 460 PANTHER OS03G0429900 PROTEIN 7 188 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Sebi76g00110 460 CDD RPA1_DBD_B_like 87 189 - -
Sebi76g00110 460 Coils Coil 440 460 - -
Sebi76g00110 460 Gene3D - 63 197 IPR012340 -
Sebi76g00110 460 SUPERFAMILY Nucleic acid-binding proteins 68 194 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi76g00110 Sebi-Chr76 2060426 2063043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi76g00110 63 283 Core DNA Replication Machinery Family AT2G06510 20.940 6.23e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi76g00110 - - lja:Lj6g3v0884310.1 256.144