Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi76g00097 ATGGATGTGATAAAGACGCAGCAGATATCATGGAGAGCGATTGAGAAGGTGGTAGTGCACCCTTTGGTGTTGCTGAGCATAGTCGACAACTACAACAGGGTCGCCAAAGACACTCGCAAACGCGTCGTTGGCGTCTTGCTTGGTTCCTCTTTCAAGGGCACCGTTGACGTTACCAACAGCTACGCCGTGCCCTTTGAAGAAGATGACAAGGATCCTAGCATCTGGTTTCTCGACCACAATTACCATGAATCAATGTTTTCTATGTTTAAGAGAATCAATGCTATGACAATGAATGAGGTGCAAATGAGAGCCAAGGGGGGAGGAGGTTGTTATTTTATCCCATACATTATACAATGCCAAAATTGTGGTGGTTCATTGGGGAAAAAAGATGGATACTGCAAGAACAGAGGCTATGTTCCAAATCCTGTTTTGGTTATAATTGATGTTGAACCTAAGGAGTTGGGAATTCCTACAAAAGCATACTATGCCGTTGAAGAGGTTAAAGAGAATGCCACTCAGAAAAGCCAAAAGGTCTTTGTACATGTACAATCAGAAATTGCTGCTCATGAAGTTGAGGAAATTGGAGTTGAACACTTGCTTAGAGATGTGAAGGATACAACCATTAGCACCCTTGCCACAGAGGTAAGTGCAAAATTGACAGCCTTGAAGGGTTTGGATGCAAGACTTAAGGAGATAAGAAGTTACCTTGACCTTGTCATTGATGGAAAGCTCCCCTTAAACCATGAGATCCTGTACCATCTGCAGGATGTATTCAACCTGCTACCAAATCTTAATGTCGCTGATCTGATCAAAGCTTTTGCAGTGAAAACGAATGATATGATGCTGGTAATATACCTATCGTCTCTCATTAGAAGTGTAATTGCACTCCACAACTTGATCAACAACAAGATGCTCAACAAGGAACATGAAAGGGAAGAAGACTCAAAATCCGTGCCTGTACCAAGTGCAGCAGGAAGTTGA 981 0.4261 MDVIKTQQISWRAIEKVVVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVTNSYAVPFEEDDKDPSIWFLDHNYHESMFSMFKRINAMTMNEVQMRAKGGGGCYFIPYIIQCQNCGGSLGKKDGYCKNRGYVPNPVLVIIDVEPKELGIPTKAYYAVEEVKENATQKSQKVFVHVQSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSAKLTALKGLDARLKEIRSYLDLVIDGKLPLNHEILYHLQDVFNLLPNLNVADLIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEREEDSKSVPVPSAAGS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi76g00097 326 MobiDBLite consensus disorder prediction 307 326 - -
Sebi76g00097 326 SMART pad1_6 16 166 IPR000555 GO:0005515|GO:0008233|GO:0008237
Sebi76g00097 326 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 15 307 - -
Sebi76g00097 326 CDD MPN_RPN7_8 15 311 IPR033858 GO:0005838
Sebi76g00097 326 Pfam Maintenance of mitochondrial structure and function 190 301 IPR024969 -
Sebi76g00097 326 Gene3D Cytidine Deaminase, domain 2 115 210 - -
Sebi76g00097 326 Gene3D Cytidine Deaminase, domain 2 10 102 - -
Sebi76g00097 326 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 13 98 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi76g00097 Sebi-Chr76 1800541 1804014 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi76g00097 19 264 Eukaryotic Initiation Factors Gene Family AT2G39990 26.400 5.56e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi76g00097 K03038 - gmx:100790393 518.079