Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi76g00083 ATGCCTAATTCTCTGCCATCATGGAATGAATCTCTGAATTTCTGTGAATGGAAGGGTGTTAAATGTGGTCATCGACATGAGAGTCACTGCCTTGCATTTGGAAATGAAGATTGGGGTGGTACTCTTGGACGCAGCCTTGGCAAATCTAACCTTCCTCAGAAACCTCAATCTTTCAAACATCAACTTGCATGGTCAAATTCCAATACAAGTTGGTCATTTGAAGCGGTTACAGGGAATCACTTCACTGGTGCCTTCCCTTCTTCAATATCCAACATCACTGAATTGGAAGGGTTTGATATATCCTCAAATGGTTTTAGTGCGCCAATACCTCCTACTTTGGGAAGCTTGTACAAACTTGAGAGGTTTCACATTGCTTATAATAACTTTGGGAGTGGAAGAGCTCATGATTTGGATTTCCTTTCCTCATTAATCAATTGTACTCAATTGCAAAAGCTTATATTGGATGGCAATGGGTTTGGTGTTACAATGGGGTTTAATCAAATATCTGGTGTCATACCTGAAGGAATTGGACAACTAATCGGTTTAACTGAATTTGATATGACAGAGAATTTCCTTGAGGGAACAATTCCAGATTCAATTGGAAAGCTTAAAAATCTAGGGAGATTGACCTTGCAAGAGAACAAATTATCTGGTAATATTCCTGCTGTTATTGGCAATCTTACTATGTTGTCTGAACTTCATTTGCTCAGCAATGAATTTGAAGGAAGCATTCCATTTACCCTCAGATACTGCACACAGTTGCAGACAATTGGTGTTTCTGGGAACAACTTAAGTGGTGATATTCCTATTCAAACATTTGGCCACCTAAAAGATTTGATAAATCTTGACTTGTCCAACAACACTTTAACTGGTTCCATTCCTTTAGAGTTTGGTGAGTTGAAGCATCTTTCCATATTGTATCTATTTGAAAACAAGTTGTCTGGTGAAATTCCAAAGGAACTTGTTGCTTGTTTGGCATTAACAGAGCTGGTGCTGGAGAGAAACTTTTTCTATGGAAGTATACCTTCCTTTTTGGGCTCTTTAAGTTCCCTTGAACTCTTAGATCTTTCTTACAACAACTTCTCAAGCACAATCCCCCCTGAACTAGAAAATCTTACATTGCTTGATTCTCTGGACTTGTCCTTTAACCAACTGTATGGTGAGGTTCCCAGAGGAGTTTTTATCAGCATCTATTATCTCAAGAAAAAGCCCAAGGAGTTATCTTCTTTACCATCTCTTCAAAATAGGTACTTGAAGGTTTCTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTAGTAGGCACTGGAGGCTTTGGTTCTGTATATAGAGGATCTCTTCTCAATTTTGAAAGACCTATTGCAGTAAAAGTGTTGAATCTTGCAACACGTGGGGCATCAAAGAGTTTCACTGCTGAATGCAAAGCTCTGGGGCAGATCAAGCACCGGAATCTTCTCAATATCTTGACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATAGTTTATGAGCATTGGATTATCTTCACACATGATTCAGAGGAAGGTGTAGTTCACTGTGACATTAAGCCAAGCAACGTTCTTCTTGATGATGACATTGTTGCCCACTTGGGAGACTTTGGGTTAGCTAGGCTCCTTCATGTGACTATGGGGCACTCAAGTAGAGATCAAGTTAGTTCCTCTGCAATTAAGGGAACTATTGGATATGTTCCCCCAGAGTATGGAGCAGGTGGCCCAGTAACACCACAAGGAGATATCTACAGCTACGGAATTCTTCTGTTGGAGATGCTCACAAGAAAGAAACCAACAGATAACCTGTTTGGTGAGGGTCTAAGCCTACACAAATTCTGTATGATGGCAATTCCGGAAGGAATCACTGAGATAGTGGATCCACGTTTGCTTGTCCCATTTGCTGAAGAACATATTGGGGTTGTGGAAGACAACATTAGGGAGTGTCTGGTGTCCTTTGCTAGAATTGGAGTTGCATGTTCTGAGGATTTCCCTGCTGAACGAATGCACATAAAAGATGTTATAGTGGAGTTACATGCAATTAAACAAAAGCTGCCCCTCTAG 2097 0.4006 MPNSLPSWNESLNFCEWKGVKCGHRHESHCLAFGNEDWGGTLGRSLGKSNLPQKPQSFKHQLAWSNSNTSWSFEAVTGNHFTGAFPSSISNITELEGFDISSNGFSAPIPPTLGSLYKLERFHIAYNNFGSGRAHDLDFLSSLINCTQLQKLILDGNGFGVTMGFNQISGVIPEGIGQLIGLTEFDMTENFLEGTIPDSIGKLKNLGRLTLQENKLSGNIPAVIGNLTMLSELHLLSNEFEGSIPFTLRYCTQLQTIGVSGNNLSGDIPIQTFGHLKDLINLDLSNNTLTGSIPLEFGELKHLSILYLFENKLSGEIPKELVACLALTELVLERNFFYGSIPSFLGSLSSLELLDLSYNNFSSTIPPELENLTLLDSLDLSFNQLYGEVPRGVFISIYYLKKKPKELSSLPSLQNRYLKVSYGELHEATNGFSSSNLVGTGGFGSVYRGSLLNFERPIAVKVLNLATRGASKSFTAECKALGQIKHRNLLNILTCCSSVDYNGEDFKAIVYEHWIIFTHDSEEGVVHCDIKPSNVLLDDDIVAHLGDFGLARLLHVTMGHSSRDQVSSSAIKGTIGYVPPEYGAGGPVTPQGDIYSYGILLLEMLTRKKPTDNLFGEGLSLHKFCMMAIPEGITEIVDPRLLVPFAEEHIGVVEDNIRECLVSFARIGVACSEDFPAERMHIKDVIVELHAIKQKLPL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi76g00083 698 SUPERFAMILY L domain-like 77 158 - -
Sebi76g00083 698 Gene3D Phosphorylase Kinase; domain 1 398 511 - -
Sebi76g00083 698 ProSiteProfiles Protein kinase domain profile. 432 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00083 698 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 136 407 - -
Sebi76g00083 698 PRINTS Leucine-rich repeat signature 348 361 - -
Sebi76g00083 698 PRINTS Leucine-rich repeat signature 279 292 - -
Sebi76g00083 698 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 507 697 - -
Sebi76g00083 698 SMART LRR_typ_2 300 324 IPR003591 -
Sebi76g00083 698 SMART LRR_typ_2 372 396 IPR003591 -
Sebi76g00083 698 SMART LRR_typ_2 203 227 IPR003591 -
Sebi76g00083 698 SMART LRR_typ_2 348 371 IPR003591 -
Sebi76g00083 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Sebi76g00083 698 Pfam Protein kinase domain 519 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00083 698 PANTHER OS04G0122200 PROTEIN 72 695 - -
Sebi76g00083 698 FunFam LRR receptor-like serine/threonine-protein kinase EFR 403 513 - -
Sebi76g00083 698 Gene3D Ribonuclease Inhibitor 1 161 IPR032675 -
Sebi76g00083 698 Gene3D Transferase(Phosphotransferase) domain 1 512 697 - -
Sebi76g00083 698 SMART serkin_6 432 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00083 698 Gene3D Ribonuclease Inhibitor 275 324 IPR032675 -
Sebi76g00083 698 Gene3D Ribonuclease Inhibitor 325 397 IPR032675 -
Sebi76g00083 698 Gene3D Ribonuclease Inhibitor 162 274 IPR032675 -
Sebi76g00083 698 ProSitePatterns Protein kinases ATP-binding region signature. 438 461 IPR017441 GO:0005524
Sebi76g00083 698 SUPERFAMILY L domain-like 163 400 - -
Sebi76g00083 698 Pfam Leucine rich repeat 253 313 IPR001611 GO:0005515
Sebi76g00083 698 Pfam Leucine rich repeat 327 385 IPR001611 GO:0005515
Sebi76g00083 698 Pfam Protein tyrosine and serine/threonine kinase 436 498 IPR001245 GO:0004672|GO:0006468
Sebi76g00083 698 SUPERFAMILY Protein kinase-like (PK-like) 407 693 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi76g00083 Sebi-Chr76 1492410 1495565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi76g00083 78 695 Receptor kinase-like Gene Family AT3G47570 38.192 6.97e-146 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi76g00083 Pkinase 8.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi76g00083 - - gmx:100776429 772.696