Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi76g00082 ATGATGGCTCTGACTTTGATCATATTGCTTTTCAGTGTTGTTTCACAAACAATGGTGTATGTGATGCCAACTACAGCTTTGAGTTCAGAGACTGATAAACCCGCTTTGCTTGATTTGAAGGAAAAGCTTACTAATGGCTTGCCTGATTCTCTGCCATCATGGAATGAATCTCTTCATTTCTGTGAATGGGAGGGTGTTACATGCTGTCATCGCCACATGAGAGTCACTTCCTTGCATTTGGAAAATCAATACTGGGGTGGTATTCTTGGACCAGCCTTGGCAAATCTAACCTTCCTCAAAATGCTCAAACTTTCCAACATCAACTTGCATGGTCAAATTCCAATACAAGTTGGTCAATTGAAGCGGTTACAGGTTCTTGACTTAAGCAGGAACAAGCTTCAGGGAGAGGTTCCTGTGGAGTTTACTAACTGCACCAGTCTCCAGGTAATTAACTTGTTGTACAATCAACTCACTGGAAAAATTCCATCATGGTTTGGATCCATGATTCAGCTTACTAAGTTACTTCTTGGTGCCAATAATTTAGTTGGTACTATCCCACCTTCTTTGGGAAATATTTCATCACTAGAGAATATAACACTTGCAAGAAATCAATTAGAAGGAAGCATACCTTATGCTTTGCGTAGGTTGTCAAATTTGAAAGAGATGAATCTGGGTTTAAATAATTTGTCAGGTGTAATCCCTCATTGTCTCTACAACCTTTCAAATATTCAAGTTTTTGTTCTCGGGATAAACCAGTTATTAGGTACTCTTCCAACAAATATACATCTTGCTTTTCCCAATCTTCAAGCATTTATCGTAGGATGGAACCAGTTAACCGGACCTTTCCCATTTTCAATATCCAACATCACCGGATTGCAATGGTTTGATATATCCTCAAATGGTTTTCATGGGTCAATACCTCATACTTTGGGAAGTTTAAACAAACTTCGGAGGTTTAACATTGGTTATAATAGTTTCGGGAGTGGAAGAGCTCATGATCTGGATTTCCTTTCCTCACTTACCAATTGTACTAAATTGCGAATGCTTATTTTGGATAGCAATAGATTTGGTGGTGTGTTGCCAGATCTTATTGGAAACTTCTCTACACATCTCATTTTGTTTAGCATGGCGAGGAATCAAATATCTGGAGTGATACCTGAAGGAATTGGACAACTAACCGGTTTAACTTCCTTTATTATGATAGAGAATTTTCTTGAGGGAAAAATTCCAGATTCAATTGGAAAGCTTAAGAATCTAGTAAGGTTAGTCTTGCAAGAAAACAAGCTATCTGGTAAAATTCCTGCTGTTATTGGCAATCTTACTATGTTGTCTGAACTTTATCTTCACACCAATCAATTTGAAGGAAGCATTCCATTTACCCTCAAATACTGCACCTGGTTGCAGTCATTAAGTGCTTCTAGCAACAACTTAAGTGGTGATATTCCCATTGAAACATTTGGCTATCTAGAAGGTTTGATAAATCTTGACTTGTCCAGCAACTCCTTGACAGGTCCCATTCCTTCAGATTTTGGTAATCTGAAGCATCTTTCTGTATTGTATCTGTATGCAAACAGGTTGTCTGGTGAAATTCCAAAGGAACTTGGTGCTTGTTTGGCATTAACAGAGCTGGTGCTGGAGAGAAACTTTCTCAATGGAAGTATACCTTCCTTCTTAGGATCCTTAAGATCCCTTGAAGTCTTAGATCTTTCTGACAACAACTTCTCAAGCACAATCCCCCCTGAACTAGAAAATCTAACATTGCTGAGTTCTTTGGACTTGTCTTTTAACCATCTCTATGGTGAGGTTCCCACAGGAGGTGTCTTCAATAACATAACAACAATTTCACTCACTGGAAATAAGGATCTTTGTGGAGGAATACCTCAACTGAAGCTACCTGCATGCTCTATGTCTCCTTCAAAGAAACACCACAAGAGGTCTCATAAAAAGAAAGTTATCCTTATCATTGTAATTGGTGGGGTTTTTATGTCTTGTATAGTTTTTATCAGCATCTATTGTCTCAAGAAAAAGCCCAAGGAGTTATCTTCTTTACCATCTCTTCAAAATAGGTATATGAAGGTTTCATATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTAGTAGGCACAGGAGGCTTTGGTTCTGTGTACAAAGGATCTCTTCTCCATTTTGAAAGACCTATTGCAGTAAAGGTGTTGAATCTTGAAACACGTGGAGCATCAAAGAGTTTCACTGCTGAATGCAAAGCTCTGGGACAGATCAAGCACCGGAATCTTCTCAATATCTTGACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTATAGTTTATGAGTTCATGCCTAATGGGAATCTAGAAAGCTTGTTGCATAGCAATGATCAACATGAGCCTAGAAATCTAAATCTCAACCTTACTCAAAGGGTTAATATTGCCCTTGATGTAGCTCAGGCATTGGATTATCTTCACAATGATTCAGAGGAAGGTGTAGTTCACTGTGACATTAAGCCAAGCAACGTTCTTCTTGATGATGACATTGTTGCCCACTTGGGAGACTTTGGGTTAGCTAGGCTCCTTCATGTGACTATGGGGCACTCAAGTAGAGATCAAGTTAGTTCCTCTGCAATTAAGGGAACTATTGGATATGTTCCTCCAGAGTATGGAGCAGGTGGCACAGTAACACCACAAGGAGATATCTACAGCTACGGAATTCTTCTGTTGGAGATGCTCACCGGAAAGAAACCTACAGATAGCATGTTTGGTGAGGATTTAAGCTTACATAAGTTGTGTAAGATGGCAATTCCAGAAGAAATCACTGAGATAGTGGATTCACGTTTGCTTATCCCATTTGCTCAAGAACAGACAGGGGTTTTGGAAAACAACAACAAGGAGTGTCTGGTGTCCTTTGCTAGAATTGGAGTTGCATGTTCTGAGGATTTCCCTGCTGAACGAATGCACATAAAAGATGTTATAGTGGAGTTACATGCAACTAAACAAAAACTACCCTGCTAG 3030 0.3914 MMALTLIILLFSVVSQTMVYVMPTTALSSETDKPALLDLKEKLTNGLPDSLPSWNESLHFCEWEGVTCCHRHMRVTSLHLENQYWGGILGPALANLTFLKMLKLSNINLHGQIPIQVGQLKRLQVLDLSRNKLQGEVPVEFTNCTSLQVINLLYNQLTGKIPSWFGSMIQLTKLLLGANNLVGTIPPSLGNISSLENITLARNQLEGSIPYALRRLSNLKEMNLGLNNLSGVIPHCLYNLSNIQVFVLGINQLLGTLPTNIHLAFPNLQAFIVGWNQLTGPFPFSISNITGLQWFDISSNGFHGSIPHTLGSLNKLRRFNIGYNSFGSGRAHDLDFLSSLTNCTKLRMLILDSNRFGGVLPDLIGNFSTHLILFSMARNQISGVIPEGIGQLTGLTSFIMIENFLEGKIPDSIGKLKNLVRLVLQENKLSGKIPAVIGNLTMLSELYLHTNQFEGSIPFTLKYCTWLQSLSASSNNLSGDIPIETFGYLEGLINLDLSSNSLTGPIPSDFGNLKHLSVLYLYANRLSGEIPKELGACLALTELVLERNFLNGSIPSFLGSLRSLEVLDLSDNNFSSTIPPELENLTLLSSLDLSFNHLYGEVPTGGVFNNITTISLTGNKDLCGGIPQLKLPACSMSPSKKHHKRSHKKKVILIIVIGGVFMSCIVFISIYCLKKKPKELSSLPSLQNRYMKVSYGELHEATNGFSSSNLVGTGGFGSVYKGSLLHFERPIAVKVLNLETRGASKSFTAECKALGQIKHRNLLNILTCCSSVDYNGEDFKAIVYEFMPNGNLESLLHSNDQHEPRNLNLNLTQRVNIALDVAQALDYLHNDSEEGVVHCDIKPSNVLLDDDIVAHLGDFGLARLLHVTMGHSSRDQVSSSAIKGTIGYVPPEYGAGGTVTPQGDIYSYGILLLEMLTGKKPTDSMFGEDLSLHKLCKMAIPEEITEIVDSRLLIPFAQEQTGVLENNNKECLVSFARIGVACSEDFPAERMHIKDVIVELHATKQKLPC 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi76g00082 1009 SMART LRR_typ_2 561 584 IPR003591 -
Sebi76g00082 1009 SMART LRR_typ_2 513 537 IPR003591 -
Sebi76g00082 1009 SMART LRR_typ_2 168 192 IPR003591 -
Sebi76g00082 1009 SMART LRR_typ_2 585 610 IPR003591 -
Sebi76g00082 1009 SMART LRR_typ_2 416 440 IPR003591 -
Sebi76g00082 1009 SMART LRR_typ_2 120 143 IPR003591 -
Sebi76g00082 1009 SMART LRR_typ_2 489 512 IPR003591 -
Sebi76g00082 1009 SMART LRR_typ_2 216 239 IPR003591 -
Sebi76g00082 1009 Gene3D Ribonuclease Inhibitor 331 643 IPR032675 -
Sebi76g00082 1009 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Sebi76g00082 1009 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 68 334 - -
Sebi76g00082 1009 FunFam LRR receptor-like serine/threonine-protein kinase EFR 676 786 - -
Sebi76g00082 1009 ProSiteProfiles Protein kinase domain profile. 705 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00082 1009 SUPERFAMILY Protein kinase-like (PK-like) 678 1000 IPR011009 -
Sebi76g00082 1009 Gene3D Ribonuclease Inhibitor 189 330 IPR032675 -
Sebi76g00082 1009 Pfam Leucine rich repeat 467 526 IPR001611 GO:0005515
Sebi76g00082 1009 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Sebi76g00082 1009 Pfam Leucine rich repeat 540 598 IPR001611 GO:0005515
Sebi76g00082 1009 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Sebi76g00082 1009 CDD STKc_IRAK 711 1000 - -
Sebi76g00082 1009 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Sebi76g00082 1009 Gene3D Transferase(Phosphotransferase) domain 1 787 1007 - -
Sebi76g00082 1009 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 342 1004 - -
Sebi76g00082 1009 SUPERFAMILY L domain-like 30 326 - -
Sebi76g00082 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Sebi76g00082 1009 Pfam Protein kinase domain 707 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00082 1009 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Sebi76g00082 1009 SUPERFAMILY L domain-like 369 624 - -
Sebi76g00082 1009 Gene3D Phosphorylase Kinase; domain 1 668 786 - -
Sebi76g00082 1009 SMART serkin_6 705 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00082 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 787 1008 - -
Sebi76g00082 1009 ProSiteProfiles Leucine-rich repeat profile. 563 586 IPR001611 GO:0005515
Sebi76g00082 1009 FunFam LRR receptor-like serine/threonine-protein kinase EFR 335 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi76g00082 Sebi-Chr76 1465350 1468680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi76g00082 21 1007 Receptor kinase-like Gene Family AT3G47570 43.731 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sebi76g00082 Pkinase 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi76g00082 - - gmx:100777490 1433.7