Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi76g00070 ATGGCCATGGCTGTGTCCAACGGCGTCGAAGCTGTGTTTGAGTTTCTGAGGAAGAATGGATTATCGGAAGCAGAGTCTGCTCTCAGAGAAGACATCATCGAGAAGAGTGATGATCTCGCTTCCTTTGACTACGAGAAGTTCTTCTTTCCGATGGTTCCGCCTCCGCCTCCGGTAAGGGTCCGGTCGTTTTCCCGGCCGTCGGAGCTTCCTGTTACCGGAGAATGCTCCAAATCGAGCTCTGCTTCGTCGGAGGATCAGTTTGTTAGCATCGGTTCACCTGCTTCTCGTGTTTCTTCTTTAGAATTCATCAATCCTTATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCTGACTCTTCATCTGATAGATTATCCCAATTTGGCACAGCGCGTGATTATCATGACTTTGATATGCAAAATGAACCATATTGGTATAATGAAAAAGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCGGATTTCTTTGGGTGTCAAAGTGAAGATAAGTTTGTCATGACAGCAGAAATGGAAAATCAGCAACACAATTCTCTGGATCTTGATTACAACTATGAAGAACTTCAATTAGAGGGGAATGATGGTTACATGGACAAGGCATGCCTTTTTAATCCTTCCTCTGTAGGGGATGAAAAAGTGACTTATTCAAAAGGCTGTTGTCATGTGGATAACAAAGATCAGTTTGATGTGGAATTAGAGGGCAAGGCTGAGAAACACACTGACACTGTTGCCTATAGTTGTGAAGTTCCACTTTGCAAAAGCTGTCCAGGTTCAGGAGGTGATTCTTGTAGTGGGGACCCTAATTTGAAGGAAATCCATCTGAATGACTTTGAATTGAAGGTTGTTAGGGATATTAACTCTTTTGATTCTGCTCTGGAGCATACTGGGAATCAAAGTTTTGACTACTACACTAAAAATGACAGCAGTGAGGGGTTCAAGGGTCCCTATGACTTAACTATCGAAGTTGATGAAATAGATCTACCAAATGGACTCGACACCTATGAACCACCGGATGTTAGAGGACTCGACCAAGAATGCCAAGATCCAGAGATTGCAGCAGATGGAGAGGATGCTACTGATGATGAGCTCTTAAAATACATTCAAGAGGATGAATATGAAGTATTTGACCTTAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGCAGGTACTATGTAACAGAATATCTTGGTTCAGCTGCCTTTAGTAGGGTTGTTCAGGCACATGATCTTCAGAAAGGAGTAGACGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTCCTGAAACTTGTCAATAAGCATGACCCAGCAGATAAACACCACATCTTGCGTCTTTATGACTATTTCTACCATCAGGAGCATTTATTCATTGTGACTGAACTTCTGCGAGCAAACTTGTATGAGTTTCAGAAATTCAATCAAGAATCTGGAGGGGAAGCATATTTTACATTGAACAGATTGCAGCTCATTACTCGTCAGTGTTTGGAGGCACTGCAATACTTGCATAACTTGGGAATTGTTCATTGCGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGGTGTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGTTTTCTAACAGACAATCTGTGTCTATATGTACAATCCCGATCCTATAGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGACGAAAAGATTGATATATGGTCTCTCGGCTGTATTTTGGCAGAGCTCTGCTCTGGTGAAGTGCTCTTTACAAATGATGCAGTTGTGATGATTCTAGCACGCATAATTGGAATGTTTGGTCCTATTGATCTGGAGATGTTGGTGAAAGGGCAGGAAACACACAAGTACTTCACCAAAGAATATGATATTTATTATGTGAATGAGGAGACTGATCAACTTGAGTACATAATTCCAGAGGAGTCATCATTGGAGCAACACCTACAGGTCACTGATACTATGTTTATCGACTTTGTCAGACACTTGCTTAGCATCAACCCCAAAAGAAGGCCTACTGCAAGACAGGCGCTAAAGCATCCATGGCTTTCCTATGTTTACAAGTCCAAGTAA 2172 0.413 MAMAVSNGVEAVFEFLRKNGLSEAESALREDIIEKSDDLASFDYEKFFFPMVPPPPPVRVRSFSRPSELPVTGECSKSSSASSEDQFVSIGSPASRVSSLEFINPYGIRSSSQTQNDSDSSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPSFEGPDFFGCQSEDKFVMTAEMENQQHNSLDLDYNYEELQLEGNDGYMDKACLFNPSSVGDEKVTYSKGCCHVDNKDQFDVELEGKAEKHTDTVAYSCEVPLCKSCPGSGGDSCSGDPNLKEIHLNDFELKVVRDINSFDSALEHTGNQSFDYYTKNDSSEGFKGPYDLTIEVDEIDLPNGLDTYEPPDVRGLDQECQDPEIAADGEDATDDELLKYIQEDEYEVFDLRIIHRKNRTGFEESKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQKGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQCLEALQYLHNLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFLTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFTNDAVVMILARIIGMFGPIDLEMLVKGQETHKYFTKEYDIYYVNEETDQLEYIIPEESSLEQHLQVTDTMFIDFVRHLLSINPKRRPTARQALKHPWLSYVYKSK 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi76g00070 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 540 552 IPR008271 GO:0004672|GO:0006468
Sebi76g00070 723 Gene3D Transferase(Phosphotransferase) domain 1 468 716 - -
Sebi76g00070 723 SUPERFAMILY Protein kinase-like (PK-like) 403 719 IPR011009 -
Sebi76g00070 723 PANTHER DUAL SPECIFICITY PROTEIN KINASE 113 716 - -
Sebi76g00070 723 CDD PKc_DYRK_like 414 716 - -
Sebi76g00070 723 Gene3D Phosphorylase Kinase; domain 1 409 495 - -
Sebi76g00070 723 ProSiteProfiles Protein kinase domain profile. 414 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00070 723 Pfam Protein kinase domain 416 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00070 723 SMART serkin_6 414 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi76g00070 723 FunFam Serine/threonine-protein kinase ppk15 493 717 - -
Sebi76g00070 723 FunFam Putative serine/threonine-protein kinase dyrk2 408 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi76g00070 Sebi-Chr76 1122858 1127344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi76g00070 411 711 MAP Kinase Gene Family AT5G19010 30.841 1.26e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Sebi76g00070 Pkinase 9.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi76g00070 - - gmx:100783988 1162.13