Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi76g00054 ATGAAGGGTTATGAACCCCGGTCAAGCTCTTCTTGTGCAGCCTGCAAGTTCTTGAAAAGAAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTTCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATTGAAGTGCCAGAGGAGCAGAGGGAGGACACTGTGAATTCACTGGCTTATGAGGCTGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATAGGTGCCATAGCACTGTTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGATCGTCTTGCTCGTTATGCTACTGCTGCTGCTACCACCCCTTCAAGTTCCACTGATATCTCGAGTTCCAATGTTAGCTTGCCACCCTTCCCTGATTTCTTCACCTGCAGTGATTTCAATGACAGCTTCTGCCACAGCTCTTCATCTCAGTCATTGAGCAGACATGAAACGGTGGATGATTTCATTCAAATCCCATATATATTTTGA 531 0.4595 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYATAAATTPSSSTDISSSNVSLPPFPDFFTCSDFNDSFCHSSSSQSLSRHETVDDFIQIPYIF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi76g00054 176 Coils Coil 90 110 - -
Sebi76g00054 176 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Sebi76g00054 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 152 - -
Sebi76g00054 176 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi76g00054 Sebi-Chr76 714692 715222 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi76g00054 1 142 AS2 family AT3G11090 64.583 2.21e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sebi76g00054 LOB 6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi76g00054 - - gmx:100777635 281.182