Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi76g00034 ATGGGTGCTGCTTATGATCAAGGTTCTAACAAATCTCTTGTGTCAATGGATTCTTCTAAAAAGAGGAAAAGTAGGAGCAGAGGGGATGGGACTAGATCCGTGGCTGAGACTCTGGCAAAATGGAAGGAGTACAATGAGCATCTTTATTCTTCTGGTTCTGGCAAAAGTGATGGTAGACCAACTCGTAAAGCCCCAGCCAAGGGTTCAAAGAAAGGGTGTATGAAAGGTAAAGGAGGACCCCAAAACTCACAGTGTAACTACAGAGGTGTTAGGCAGAGAACATGGGGAAAATGGGTTGGTGAGATTCGGGAACCAAATAGAGGAAGTAGGCTTTGGTTAGGTACTTTCTCTACTGCACAAGAAGCTGCTCTTGCATATGATGAAGCTGCTAGGGCCATGTATGGTCCTTGTGCACGCCTCAATTTTCCTCACATCTTAGATTATACATCTATTAGAGAACAATTGAAGGAATCTTCCTCCGCGGGTGGAACATGTTCTTGTTCTTCAGTGGCAACTCCTGCAACCTCTGACACAACTACTATATCCAATCAATCCGAGGTTTGTGCAGCTGAGGATGTTAAGGAGAAACCTCGACCTGTCAATATCAACAATACTGTCAATGTTTGTCATCAAGTTTATGAATCTGGATCACCAACTAGTAAAATGAAACAAGTGCCGAAGGATGAGCCTGTGGATCTCACAGATGACCCTGCATCTGGGGAAATCCAAGATATCTTCAAACCTGAAAGAACACATGATGAAGGGAAGGTTGGCGAGGATGTATGTATAGATCAGATGGATTTTTCATGGATTGATAACATTGATTTTAATGGTGATTACTTGAAGAGCTTCTCCATGGATGAGTTATTTCAGGTGGATGAACTTTTGGGGCATATAGACAACAATCCGATAGATAACTCTGGGTTGATGCAAGGTTTGGATTTTGGACTAGTGGGCTTTCCTGAAGAAAGTAATCCTCAGGCTGAGACGCCTTCAAGCTTTATGTATCAATTGCAAAATCCAGATGCCAAGCTGCTGGGAAGTTTGCCACACATGGAACAAACACCATCTGGTGTTGATTATGGATTGGATTTCCTAAAAACAGAAGAGGCAGGGGACTATAATGGTGGAGGGGAAGAGTCAAGATTTCTTAATCTGGATTATGATCTGAACAATGATTCAAAAGGAATGCAAGCAAGCAAGGAAGGGTGA 1212 0.4274 MGAAYDQGSNKSLVSMDSSKKRKSRSRGDGTRSVAETLAKWKEYNEHLYSSGSGKSDGRPTRKAPAKGSKKGCMKGKGGPQNSQCNYRGVRQRTWGKWVGEIREPNRGSRLWLGTFSTAQEAALAYDEAARAMYGPCARLNFPHILDYTSIREQLKESSSAGGTCSCSSVATPATSDTTTISNQSEVCAAEDVKEKPRPVNINNTVNVCHQVYESGSPTSKMKQVPKDEPVDLTDDPASGEIQDIFKPERTHDEGKVGEDVCIDQMDFSWIDNIDFNGDYLKSFSMDELFQVDELLGHIDNNPIDNSGLMQGLDFGLVGFPEESNPQAETPSSFMYQLQNPDAKLLGSLPHMEQTPSGVDYGLDFLKTEEAGDYNGGGEESRFLNLDYDLNNDSKGMQASKEG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi76g00034 403 MobiDBLite consensus disorder prediction 48 86 - -
Sebi76g00034 403 MobiDBLite consensus disorder prediction 1 34 - -
Sebi76g00034 403 Pfam AP2 domain 85 135 IPR001471 GO:0003700|GO:0006355
Sebi76g00034 403 SUPERFAMILY DNA-binding domain 86 144 IPR016177 GO:0003677
Sebi76g00034 403 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Sebi76g00034 403 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Sebi76g00034 403 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Sebi76g00034 403 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 19 362 - -
Sebi76g00034 403 MobiDBLite consensus disorder prediction 217 239 - -
Sebi76g00034 403 CDD AP2 85 144 IPR001471 GO:0003700|GO:0006355
Sebi76g00034 403 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Sebi76g00034 403 Gene3D AP2/ERF domain 86 145 IPR036955 GO:0003700|GO:0006355
Sebi76g00034 403 MobiDBLite consensus disorder prediction 16 30 - -
Sebi76g00034 403 FunFam Ethylene-responsive transcription factor 2 85 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi76g00034 Sebi-Chr76 405991 407202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi76g00034 9 387 AP2-EREBP Transcription Factor Family AT2G40340 38.144 5.89e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi76g00034 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi76g00034 - K09286 gmx:100800134 561.607