Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi769g00002 ATGGCGATGGTGCTTGGGCTCTATCACTCCATAAAAAGTCTGTGTGGGATGCGTCAGAATTGGAGGTTGAGGGTAAAGTTGGTCAGGGTTTGGAATATGACATCTGTGGCTAAGCCTAATGATCCATATGCTAGGCAAATGGTTTTCATCGATGAGGAGGGTGGTAGGATTGAAGCAACGGTCCCAAAGCAACACATGAACAAATTTGCTCATGCTTTGGTGGAGGGCCAAATGTACATGATAACAAATTTCGGTCTACTAAAAAACTCAGGGAAGTTTAGAGCTGCTGTTCATGAATTTAAGGTGATTTTCAATGCAACTACCGTCCTGAGTCCTTGCCAACATTTTTCAATTCCCTCCTCCAGATTTGCATTGATGAAGACTGATGAAATAAAGAGGACACAGGGACGATCAGATTATCTATTTCATGGGCATGGTATCCGCCGTTTCAGAGGAGATGAAGTTAAGCAAGGAGGGGAGGCAGACCACCTCATGTTGATCGATTTAGTCGATGAGATGGGAGAGATACGTCTAGCTTTGTTTGGGGAGATGATAGATGTGGTTGCCGACTTTCTATCTCTTCCTCGGTCTGGACTGCCTGTACTGATAATACAATTGGCTAAAGTCAATCTATACAAAGGTGAAGTGGGGATCCAGAATGTTTTCAATGCTTCAAAAGTTCTGTGGAACCCAGACATTCCTGAGGCAATAAAGTTTAGGAATGGGAGCAGGCCTGTGTCGTTGAAAGAAGAATTCTCGGACTTGTATCCGAGAAAGTCAGTGGCACAATTGCAGCAGATGGATGAGGATAGGTCGTTTATAATCTTGGGGAGAGTGGAGCAAGTTATCCAGGATGGGTTTTGGTGGTATATGGCATATCATTGCATGAAAGTTGTATCATATGATGATGGGGTTCCTTTTTGTCAAGATTGTGATTGTTATGTTTATGATCTAACCCCCAGATACAAGCTAAAAATGGAGGTTTCTGATGCAACGGATAGTGCTCAATTGATTTTATTTGACTCTGAATGTTATGCCTTATTTCATGTCATTCCAAAGGTTCACAAGTTTAAAATTTATTTTCCTCAAATGTTGAACCAGACTGTGAAGAGTAGTGCTCATCCATCAGCCCTATGTGACATTGTTGGCCATGAGATTCTATTTAGAGTTGAGCGAAAGGATGATCATTCATTCACCTATGAGGAATGCTACCGAGTGAGTAGGGTGTGTCTAGAGCAAGATGTTATTCTAGAGTTCAAGAGTGGAATGGATGAGGAAACTCCATTGAAGCTCAAGTTTGTGTTGTCATTTACAAAGATTGAGGGGGGAGAGGCCAACGAACGTGTCATTGATTTATCACCTCAATGCAATTCTGTAGTGACTGATACAGAGGTTAGCCCAGTTGCATGTGGGGCGTCGCCCTCAGTGGTGGAGGATGCTGCCACGACTATTAAGAGGGAAGTAGAGCATTCGGCTGATGGACTCTGTGATAGGAAGAAACGACCTAGGCCGAGAGGGGTGAAGATTGAGAGGAATTGA 1539 0.4321 MAMVLGLYHSIKSLCGMRQNWRLRVKLVRVWNMTSVAKPNDPYARQMVFIDEEGGRIEATVPKQHMNKFAHALVEGQMYMITNFGLLKNSGKFRAAVHEFKVIFNATTVLSPCQHFSIPSSRFALMKTDEIKRTQGRSDYLFHGHGIRRFRGDEVKQGGEADHLMLIDLVDEMGEIRLALFGEMIDVVADFLSLPRSGLPVLIIQLAKVNLYKGEVGIQNVFNASKVLWNPDIPEAIKFRNGSRPVSLKEEFSDLYPRKSVAQLQQMDEDRSFIILGRVEQVIQDGFWWYMAYHCMKVVSYDDGVPFCQDCDCYVYDLTPRYKLKMEVSDATDSAQLILFDSECYALFHVIPKVHKFKIYFPQMLNQTVKSSAHPSALCDIVGHEILFRVERKDDHSFTYEECYRVSRVCLEQDVILEFKSGMDEETPLKLKFVLSFTKIEGGEANERVIDLSPQCNSVVTDTEVSPVACGASPSVVEDAATTIKREVEHSADGLCDRKKRPRPRGVKIERN 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi769g00002 512 Gene3D - 249 414 IPR012340 -
Sebi769g00002 512 Gene3D - 7 113 IPR012340 -
Sebi769g00002 512 Gene3D - 117 246 IPR012340 -
Sebi769g00002 512 SUPERFAMILY Nucleic acid-binding proteins 8 116 IPR012340 -
Sebi769g00002 512 MobiDBLite consensus disorder prediction 493 512 - -
Sebi769g00002 512 CDD RPA1_DBD_A_like 22 109 - -
Sebi769g00002 512 SUPERFAMILY Nucleic acid-binding proteins 156 241 IPR012340 -
Sebi769g00002 512 Pfam Domain of unknown function DUF223 47 129 IPR003871 -
Sebi769g00002 512 SUPERFAMILY Nucleic acid-binding proteins 256 396 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi769g00002 Sebi-Chr769 41825 44333 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi769g00002 11 340 Core DNA Replication Machinery Family AT4G19130 21.978 1.75e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi769g00002 - - lja:Lj6g3v0884310.1 287.345