Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi768g00019 ATGCAGGAGTATGCAACTGCATCTTTGCTCACTCTATCTGCCTCTACAACCAACAAACCAATTATTAGTTCTTATGGCACCATTCCTCTTCTTGTGGAGATTCTTAGAGATGGAAGCTCACAAGCTAAAATTGATTCTGTAATGGCTCTGTCCAATTTATCAACACACCCTGACAACCTCAGCATCATTCTTGAAACAAATCCAATCCCTCTTATAGTTGATCTTCTCAAGACCTGTAAGAAATCCTCAAAAACAGCTGAAAAATGCTGTGGTTTGATAGAGTCCTTGGTGGGTTATGATGAGGGAAGAACTTCCTTAACATCTGAAGAAGGTGGGGTTCTTGCAGTTGTGGAAGTTCTTGAAAATGGGACTCCTCAAAGCAGGGAACATGCTGTTGGGGCACTGCTTACAATGTGCCAAAGTGATAGGTGTAAATACAGAGAACCAATTCTTAGGGAAGGTGTTATTCCAGGACTTCTTGAGCTAACTGTTCAAGGAACACCAAAGTCTCAGCCAAAGGCACGTACCCTTTTGCAGTTACTAAGAGAATCTCCTTATTCAAGATCTGAAATTGAACCTGACACTCTTGAGAACATAGTGTGTGACATCATATCACAGATTGATGGGGATGATCAATCTGGTAAAGCAAAGAAGATGCTAGCTGAGATGGTCCAAGTTAGCATGGAACAGAGTTTGAGACATTTACAACAAAGAGCTCTTGTATGCACCACAACTAGTGATATTCCTATTACTAGTTGTGCTTCTGAAGTTTCTTCAAAATGA 783 0.4074 MQEYATASLLTLSASTTNKPIISSYGTIPLLVEILRDGSSQAKIDSVMALSNLSTHPDNLSIILETNPIPLIVDLLKTCKKSSKTAEKCCGLIESLVGYDEGRTSLTSEEGGVLAVVEVLENGTPQSREHAVGALLTMCQSDRCKYREPILREGVIPGLLELTVQGTPKSQPKARTLLQLLRESPYSRSEIEPDTLENIVCDIISQIDGDDQSGKAKKMLAEMVQVSMEQSLRHLQQRALVCTTTSDIPITSCASEVSSK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi768g00019 260 Gene3D - 1 237 IPR011989 -
Sebi768g00019 260 PANTHER U BOX DOMAIN-CONTAINING 2 187 - -
Sebi768g00019 260 SUPERFAMILY ARM repeat 2 194 IPR016024 -
Sebi768g00019 260 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 26 68 IPR000225 GO:0005515
Sebi768g00019 260 FunFam Ubiquitin-protein ligase, expressed 23 223 - -
Sebi768g00019 260 SMART arm_5 15 55 IPR000225 GO:0005515
Sebi768g00019 260 SMART arm_5 100 140 IPR000225 GO:0005515
Sebi768g00019 260 SMART arm_5 56 98 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi768g00019 Sebi-Chr768 385264 386046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi768g00019 2 182 U-box Gene Family AT2G23140 32.044 1.17e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi768g00019 - - gmx:100793971 419.853