Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi768g00014 ATGGCTCTGGCCAATGACAAAATTCCTTGTGGTTCAAGCATGAGCAGTAGAAAGTTTCAAACTTGTGCTCTTGATGAGACTTCTATGGAGATTTCTCCTCATGGGGTCAAGGATTATCAAAAATCTGTTGTTGAAGAGGAAGATGGATCACAGAGTACTAATGGCCTCAGCAATGATTCAGCTTCAGCTTCAGCTATAACCCATTCTTCTCCTTTATGTGGCAGTGCAAATGGGTATGTTTACAAGAGTTCAAATTATCAACTTGAAGAAGCAGAGTCTCTGATTAATTTCAAAGCCAATGAGTATAGCAACCTCATGCAAGGTAGTGAATCTGTTCTTAGCTTTCAGCAGAGCTGGTTGGTCTCCAATGAGGACAATTTGAACCAATGGAATCATATTAGTCCTAAAGGCACCACAAACTTGAGCATGGTTCAGGATTTCACTTGCTTTGAAACTTCCAGTGGCTATAGCTCCATGTTTAACAGTGCAAAAGAGAAACAACATGGTGAAAGTTCATATGAGTGGCTATACTCTGAACCAAATGTCCCTGGTGAAAGTCTCAAGGAGTCATCAACACAAGAATCAATCTTGAAGAAGCGTTCTTCAATGGGAGAGAATATGCAAAATTCCAATGCCAAGAAGCCATGCACAACTGCAAGCAAAATAGCAAAACCCAAGTCAAACCCATCTAAAGATCCTCAAAGTGTTGCTGCTAAGAATAGAAGAGAGAGAATAAGTGAGAGGCTTAAGATCCTACAAGAACTTGTACCCAACGGCTCCAAAGTTGATTTGGTTACCATGTTGGAGAAAGCAATTAGTTATGTGAAGTTTCTTCAGTTGCAAGTGAAGGTGGGACATGAACACAATGCAGTGTTGGCAGCTGATGAATTTTGGCCTGTCCAAGGTGGAAAAGCTCCTGACATTTCTCAAGTAAGACAAGCCATTGATGCCATTCTTTCATCTCAAAGATGA 972 0.4074 MALANDKIPCGSSMSSRKFQTCALDETSMEISPHGVKDYQKSVVEEEDGSQSTNGLSNDSASASAITHSSPLCGSANGYVYKSSNYQLEEAESLINFKANEYSNLMQGSESVLSFQQSWLVSNEDNLNQWNHISPKGTTNLSMVQDFTCFETSSGYSSMFNSAKEKQHGESSYEWLYSEPNVPGESLKESSTQESILKKRSSMGENMQNSNAKKPCTTASKIAKPKSNPSKDPQSVAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAISYVKFLQLQVKVGHEHNAVLAADEFWPVQGGKAPDISQVRQAIDAILSSQR 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi768g00014 323 CDD bHLH_AtIND_like 230 299 - -
Sebi768g00014 323 MobiDBLite consensus disorder prediction 201 241 - -
Sebi768g00014 323 MobiDBLite consensus disorder prediction 201 235 - -
Sebi768g00014 323 Pfam Helix-loop-helix DNA-binding domain 239 279 IPR011598 GO:0046983
Sebi768g00014 323 Gene3D - 224 289 IPR036638 GO:0046983
Sebi768g00014 323 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 78 284 IPR045843 GO:0003700|GO:0006355
Sebi768g00014 323 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 227 292 IPR036638 GO:0046983
Sebi768g00014 323 MobiDBLite consensus disorder prediction 33 62 - -
Sebi768g00014 323 MobiDBLite consensus disorder prediction 46 62 - -
Sebi768g00014 323 FunFam Transcription factor bHLH83 227 286 - -
Sebi768g00014 323 SMART finulus 235 284 IPR011598 GO:0046983
Sebi768g00014 323 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 229 278 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi768g00014 Sebi-Chr768 322348 323953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi768g00014 78 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 45.038 5.66e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sebi768g00014 HLH 1.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi768g00014 - - gmx:106795957 437.187