Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi767g00016 ATGGAGGATTCTTCAGCTTCAGCAGGTGAAGACACCAATAAGAATACTTGTCCTCGTGGTCACTGGAGACCTGCTGAAGATGAAAAGTTAAGACAACTTGTTGAACAATATGGTGCTCAAAACTGGAATTCAATTGCTGAGAAGCTCCAAGGAAGATCAGGGAAAAGTTGTAGATTGAGGTGGTTCAATCAGCTTGATCCTCGAATTAACAGAAGACCATTCACGGAAGAGGAAGAAGAAGAGAGGTTACTTGCAGCGCATCGTATTCATGGGAACAAGTGGGCACTGATAGCGAGGCTTTTCCCTGGTAGAACTGATAATGCTGTCAAGAATCACTGGCATGTTATAATGGCAAGAAAGCAAGGGAACAGTCCAAGTTATGTGGGAAGAGAACTTTCCAAGACGTTTATAATGATTATTCTTCTATCAACACTATTCATCATCACTTCCCTCCTGCTGATAAAAGATCACAGTTATTCACCACCACCAGATCAATTGATAATATTAATGGAAGATTCTTTGACTTTCAGAACCAGGAGAATAATATTAATAAAGATAGGATACTAA 567 0.3986 MEDSSASAGEDTNKNTCPRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPRINRRPFTEEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQGNSPSYVGRELSKTFIMIILLSTLFIITSLLLIKDHSYSPPPDQLIILMEDSLTFRTRRIILIKIGY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi767g00016 188 FunFam MYB transcription factor 19 70 - -
Sebi767g00016 188 CDD SANT 22 63 IPR001005 -
Sebi767g00016 188 ProSiteProfiles Myb-like domain profile. 19 65 IPR001005 -
Sebi767g00016 188 ProSiteProfiles Myb-like domain profile. 66 117 IPR001005 -
Sebi767g00016 188 CDD SANT 83 114 IPR001005 -
Sebi767g00016 188 PANTHER MYB PROTEIN-RELATED 19 126 - -
Sebi767g00016 188 Gene3D - 19 70 - -
Sebi767g00016 188 SUPERFAMILY Homeodomain-like 18 113 IPR009057 -
Sebi767g00016 188 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 121 IPR017930 -
Sebi767g00016 188 MobiDBLite consensus disorder prediction 1 24 - -
Sebi767g00016 188 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 69 IPR017930 -
Sebi767g00016 188 Pfam Myb-like DNA-binding domain 22 80 - -
Sebi767g00016 188 Gene3D - 73 128 - -
Sebi767g00016 188 SMART sant 70 119 IPR001005 -
Sebi767g00016 188 SMART sant 18 67 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi767g00016 Sebi-Chr767 369580 370252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi767g00016 17 134 MYB Transcription Factor Family AT1G17950 78.814 1.43e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi767g00016 Myb_DNA-bind_6 5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi767g00016 K09422 - cave:132185639 231.491