Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi767g00005 ATGGAGAGCCCTCCTCCTCCGTCTTACATTGTGGTTGCGGCTGATGCCACCAGAGACCGCAATGAGCATGAGATCAAGCTCATCATTGATCACATTCGGGCCAGGGGTGACATTCTCTCTGCTCGTGATAGGTTGCTTCTGCTCTGCGTCTTGCATAAGGTGTCTCACCCAATGGGATATCAGACATTAGCATGCCCCGAGTCTTTTTCTGGCACGAACTTTCGTGCAATGGAGGAAGAAGTCAGAAAGAAAGTGGACTTATATGCAAATGAACTTCTATCAAGTTATGAAGATTTTGAAAATGAAGGGGTTAGTATTGACATTCAAGTCACCGCGGGTTTTCCAATTAGACAGGTTATTTTACAAGAGGTTACAAACTATAATGCATCTTGGATTATACTAGATAGACATCTTCGGCGCGACCTGAGATACCACCTTAACAAGATGCCATGTAAGGTTGCATTGGTTAAAGATGACTTATCTGTGGAAATATGGAGATCTCATTGTACACAAGACACAATTGTCACAGAAACAAAGCTTATCTATTCATTGTCCAAGTTCGTGTCACTATCAGATTGTCATAATAATCAAGACTTCGAGCAGTCTATTTACTCTTGCAAAAGTTATCCCCATTCCATAACTTCTTCTGATACCTCTAGTACCATTAAGAGCTATACAAAGCATTCATATGCTAACAGGTCACGGGATCACAGTTCTTTATTAGATTTTGGATCTTCTTCTAAGCATGAAAGATCAGGCATAAGCATCACAGGAGAATATAGACATTTCATTACTTCTCAGATTGGTCAAAAGCAAAACCAATGTGGCTTTCTACCAAAATCTTCAGATGCACCAATTCTTTGTGCTGGCTGTGGGACAAAGACTGAGTTATCTATCAAGGAGTCCATGAGGTTCAACTATTCTGAAATACAGCTTGCAACAAATGATTTTTCAAAGGATAACTTAGTAGGTGAAGGTGGATATGGTCATGTATACAAGGGTGTGCTTAAAGATGGACAGCAAATTGCTGCAAAGGTAAGGAAAGAAGAAAGTACACAAGGGTTTTCTGAATTTCATTCTGAGGTGTATGTCTTAAGCTTTGCTCGACACAAGAATATAGTGATGCTGCTGGGTTACTGTTGCAAAGAGAAGAAGAATATTCTGATATATGAATATATTTGCAATAAGTCTCTTCATTGGCATTTATTTGCAGTTCTTGATTGGCCCCAAAGGTATGCTATTGCCATTGGAACTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGTGGCCCTATTATTCATAGAGACATGCGACCAAGCAATATACTTCTCACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCCAAATGGAAAACTGGTGATGATCCTCTTCAAACAAGGATAATGGGCACTTTAGGATACCTTGCTCCTGAGTATGCTGAAGATGGTATTGTTTCTGAAGGGACAGATGTGTATTCTTATGGCGTTATTCTGTTACAATTGATATCAGGACGCAAAGTGGGCAACTCCAATAATTCGGAACAACAACAATCTCTCCGACAATGGGCTGAGCCAATCATTGAGAGGTTGGCTTTACATGAACTGATTGACCCTCGTTTGGGAGAATCATATGACACATATGAACTATACCTCATGGCTAAAGCAGCATACTTTTGTATGCAAAGAAAGCCTGAGATGCGTCCATCAATGGGAGAGGTTGTGCGCCTTCTTGAGGGAGAAAGTAATCACTTCCTTTCCTTGGAAGATCAATTTGTACCTAATCATGACAGTTGA 1809 0.4069 MESPPPPSYIVVAADATRDRNEHEIKLIIDHIRARGDILSARDRLLLLCVLHKVSHPMGYQTLACPESFSGTNFRAMEEEVRKKVDLYANELLSSYEDFENEGVSIDIQVTAGFPIRQVILQEVTNYNASWIILDRHLRRDLRYHLNKMPCKVALVKDDLSVEIWRSHCTQDTIVTETKLIYSLSKFVSLSDCHNNQDFEQSIYSCKSYPHSITSSDTSSTIKSYTKHSYANRSRDHSSLLDFGSSSKHERSGISITGEYRHFITSQIGQKQNQCGFLPKSSDAPILCAGCGTKTELSIKESMRFNYSEIQLATNDFSKDNLVGEGGYGHVYKGVLKDGQQIAAKVRKEESTQGFSEFHSEVYVLSFARHKNIVMLLGYCCKEKKNILIYEYICNKSLHWHLFAVLDWPQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDDPLQTRIMGTLGYLAPEYAEDGIVSEGTDVYSYGVILLQLISGRKVGNSNNSEQQQSLRQWAEPIIERLALHELIDPRLGESYDTYELYLMAKAAYFCMQRKPEMRPSMGEVVRLLEGESNHFLSLEDQFVPNHDS 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi767g00005 602 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 10 158 - -
Sebi767g00005 602 Gene3D Transferase(Phosphotransferase) domain 1 393 595 - -
Sebi767g00005 602 PANTHER OS01G0253100 PROTEIN 216 585 - -
Sebi767g00005 602 ProSitePatterns Tyrosine protein kinases specific active-site signature. 434 446 IPR008266 GO:0004672|GO:0006468
Sebi767g00005 602 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 289 392 - -
Sebi767g00005 602 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 394 589 - -
Sebi767g00005 602 Gene3D Phosphorylase Kinase; domain 1 289 392 - -
Sebi767g00005 602 Pfam Protein kinase domain 318 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi767g00005 602 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Sebi767g00005 602 SUPERFAMILY Protein kinase-like (PK-like) 301 582 IPR011009 -
Sebi767g00005 602 ProSiteProfiles Protein kinase domain profile. 317 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi767g00005 602 Gene3D HUPs 9 158 IPR014729 -
Sebi767g00005 602 CDD STKc_IRAK 323 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi767g00005 Sebi-Chr767 85066 90817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi767g00005 305 583 Trihelix Transcription Factor Family AT5G38560 45.517 2.01e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sebi767g00005 Pkinase 6.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi767g00005 - - vun:114163670 1013.45