Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi766g00001 ATGAGTCCCCAAAACAACTTCCTATCCCTTTTGGTTCCCCTGGCTGCAATCTTTGCATCTCTGTATCTCATAAATCCAAATCCACAGTTCCTCCAAAATTTCACATACTTCACTCTCACAACTTTGTCACCACCATCTATGTACTTGTCACTTCCTTTAACTTACAACCATCATCATAGACCACACAAAAAACACCCTGATAGTGGAAATAATGCTAGTTCTAATATTTGTGATGATTTTCCACCAGGCATTCCACCACCAAACACCAATACCACTTCATATCTTTGTGTTGATCGAAAAGGGTGTTGTAATTTCACAACAGTACAAGCAGCCGTTAATGCAGTTCCAGATTTCAGCTTAAAAAGAACCATAATATGGATTAATAGTGGCATCTACTATGAGAAAATCATGGTGCTTAGAACCAAACCCAACATTACATTTCAAGGACAAGGCTACACTTCAACAGCACTTGCATGGAATGATACTGCAAAGTCAGCGAATGGCACGTTTTATAGTGGCTCTGTTCAAGTTTTTGCCTCTAACTTCAGTGCTAAGAACATAAGCTTCATGAATTTAGCACCAATTCCTGTCCCTGGGGCTGAAGGAGCACAAGCAGTAGCCATTAGAATATCAGGGGATCAAGCTGAATTCAGGGGTTGTGGATTCTTTGGAGCACAAGACACCCTTCATGATGATAAGGGTCGTCATTACTTCAAAGATTGCTATATTCAAGGCTCCATTGATTTCATATTTGGCAATGCAAGGTCACTCTATGAGAATTGTCAATTAGTTTCTATAGCAAATCCATTGCCACCGGGGCAAAAGAGCATAAATGGTGCTGTTACAGCTCATGGTAGAGTTTCAGGGGATGAAAATACAGGATTTGCATTTGTGAATAGTACAATAGGAGGCAACGGAAGAATATGGTTGGGTCGAGCATGGAGGCCATATTCCCGTGTTGTTTTTGCCTTCACAGTAATGTCAGATATCATTGCCCCTGAAGGTTGGAATGATTTCAATGACCCAACAAGAGACCAGACTATATTCTATGGAGAGTACAATTGCTCTGGGCCTGGGGCTAATATGGCATTGAGGGCACCTTATGTACAGAGATTAAACGATACACAAGCTTTTCCATTCCTCAATACAAGTTTTATTGATGGAGAGCAATGGTTGGAAACTTAG 1185 0.4076 MSPQNNFLSLLVPLAAIFASLYLINPNPQFLQNFTYFTLTTLSPPSMYLSLPLTYNHHHRPHKKHPDSGNNASSNICDDFPPGIPPPNTNTTSYLCVDRKGCCNFTTVQAAVNAVPDFSLKRTIIWINSGIYYEKIMVLRTKPNITFQGQGYTSTALAWNDTAKSANGTFYSGSVQVFASNFSAKNISFMNLAPIPVPGAEGAQAVAIRISGDQAEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQLVSIANPLPPGQKSINGAVTAHGRVSGDENTGFAFVNSTIGGNGRIWLGRAWRPYSRVVFAFTVMSDIIAPEGWNDFNDPTRDQTIFYGEYNCSGPGANMALRAPYVQRLNDTQAFPFLNTSFIDGEQWLET 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi766g00001 394 FunFam Pectinesterase 89 394 - -
Sebi766g00001 394 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Sebi766g00001 394 Pfam Pectinesterase 97 388 IPR000070 GO:0030599|GO:0042545
Sebi766g00001 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 83 393 - -
Sebi766g00001 394 MobiDBLite consensus disorder prediction 59 82 - -
Sebi766g00001 394 SUPERFAMILY Pectin lyase-like 94 392 IPR011050 -
Sebi766g00001 394 Gene3D - 88 394 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi766g00001 Sebi-Chr766 67751 71895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi766g00001 75 393 Carbohydrate Esterase AT1G05310 73.354 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi766g00001 - - gmx:100806629 687.182