Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi764g00023 ATGTCCATTCACTCTGTGAGCTCTGGCAGGAACAACTCAATCAAGGAAGTGAGTTTCAACCATTCAGGACCAAAACCTGTTCGATATGGTTCCTCAAAAGGTGCTGATTCTGATGGACTCAGCTTGTCCCAGAAGGAACTCAGAGATGAAGATGCAAGATTGGTTTATATAAATGATCCTGAAAAGACCAATGAGACTATTGAATTTTCAGGGAATTCAATCCGTACTTCAAAATACTCCATCATCACTTTTATCCCAAGGAATCTGTTTGAACAATTCCACAGAGTTGCTTATATTTATTTTCTTATAATTGCCATTCTCAATCAGCTTCCTCAGCTTGCAGTGTTTGGGAGGGGTGTTTCTATTATTCCATTAGCCTTTGTCCTGTTTGTTACAGGTGTGAAGGATGCTTTTGAGGATTGGAGGAGGCACAAGTCAGATAAAATTGAGAACAACAGGTTAGCATCAGTTTTAGTTAATGATAAATTCATAGAGAAGAAATGGAAGGATATAAGGGTTGGTGAGATCATAAAAATAAAGGCAAATGAAACCATTCCTTGTGATATTGTGTTGCTCTCAACTAGTGATCCAACTGGAGTTGCATATGTGCAGACTATTAATCTAGATGGAGAGTCCAATTTGAAGACTAGGTATGCAAAACAAGAGACAGGTTCAAAGGTTCCTGAGAAGGAGAGGATTAATGGGTTGATTAAGTGTGAGAAACCAAATAGGAATATATATGGATTTCAAGCTAACATGGAAATTGATGGCAAGAAGTTATCACTTGGATCCTCTAATATTGTCCTTAGAGGGTGTGAACTTAAGAATACTAGTTGGGCACTTGGTGTTGCTGTGTATTGTGGCCGTGAGACCAAAGCTATGCTCAATAGTTCAGGAGCTCCATCCAAGAGGAGTAGGTTGGAGACACGCATGAACTCTGAGATCATCATACTTTCTTTCTTTCTTGTAGCTTTGTGTACAGTCACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCTCTTGCCTTATTATAGGAAGCTGGATTTTTCAGATGGGGAAGTTGAAAGCTATAAATACTATGGATGGGGATTGGAAATTTTTTTCACATTCCTTATGTCAGTTATAGTATTTCAGGTCATGATTCCTATATCCTTGTACATTTCTATGGAGCTTGTTCGTGTTGGTCAGGCCTACTTCATGATTGAAGACAACAAAATGTATGATGAGGAAACAAATTCAAGATTTCAGTGCAGGGCTTTGAACATTAATGAAGATTTGGGGCAGATTAAATATGTGTTCTCTGATAAAACTGGTACACTTACTGAGAACAAGATGGAGTTTCAATGTGCAAGCATCTGGGGGGTTGATTATAGTGCTACAAAAGCCAGCATTGAGGATGAGCAAGTTGAATATTCTGTACAAGTGGATGGAAAGGTTTTGAGACCAAAGATGAAGGTGAAAGTTAATCCAGAGCTTTTGCATTTATCAAGAAGAGGACTTGAAAATAAGGAGGCAAAACGGATTCATGATTTCTTTCTAGCACTTGCAACCTGCAATACTATTGTGCCTATTGTTGTTGACACACCTGATCCTGATGTCAAGCTGATAGATTACCAAGGAGAATCACCAGATGAACAAGCATTAGCATATGCTGCTGCAGCCTATGGTTTTATGCTTATAGAACGAACCTCAGGCCATGTAGTCATTGATATTCAGGGAGAAAGAAAAAAGTTAAATGTCTTGGGTTTGCATGAATTTGACAGTGATAGGAAGAGGATGTCAGTTATATTGGGGTACCCTGACAATTCTGTGAAAGCTTTTGTCAAAGGTGCAGATACATCCATGCTTAGTGTGGCAGATAAATCACTTTACATGAACTTAATAAGAGCCACTGAAGCCCATCTTCACTCTTATTCTTCATTGGGTTTGAGGACACTTGTTATTGGAATGAGGGAATTGAATGTTTCAGAATATGAGCAATGGCATACTGCATATGAGGCAGCAAGCACTGCTTTGTTTGGTAGGGCTGCTTTGCTCCGCAAGATTTCTAGCAATGTAGAGAACAATATATGCATATTGGGAGCATCTGCTATTGAAGATAAACTGCAGAAAGGTGTTCCAGAAGCTATTGAGTCTCTAAGGACTGCAGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAAGAAACTGCCATATCCATTGGTTACTCCTCAAAGCTTTTAACAAATAAAATGACTCAAGTTATAATCAATAGCAACAATAAAGCCTCATGTAGAAAATGTTTAGATGATGCCCTTGTCATGTCTAAAAAACTCAAGTCCACATCTGGCAACAATACTCGAGGAAGTTCTGATGCAGTTACAACTCAGATAGCCTTGATTATTGATGGTGGCAGCCTTGTACATATCCTTGACAGTGAACTTGAAGAACAGCTATTTCATCTTGCAAGTAAATGTTCTGTGGTGCTTTGTTGTCGAGTGGCACCATTGCAAAAGGCTGGGATTGTTTCCCTTGTGAAGAATAGGACATCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTGTCAATGATTCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAAGAGGGTAGGCAAGCAGTAATGTCATCAGATTTTGCAATGGGGCAGTTTAGAAATGCTGTCCTTGTTCTTGTCCTATTTTGGTATGTGCTCTACACTGCCTTCACTTTGACAAGTGCTATAAATGAGTGGAGTACCACATTATATTCAATAATCTACAGTTCATTGCCAACTATTATTGTTGGTATTCTCGACAAGGATCTTGGTAGAAGGACTCTCCTAAAGTATCCTCAGCTTTATGGTGCTGGACAGAGACATGAGGCCTACAACAAAAAATTGTTTTTGTTGACAATGGCTGATACTTTGTGGCAAAGCATGGCTATCTTTTGGCCTCCCCTCTTTGCATATTGGAGTAGCAATATAGATGTGGCAAGTATAGGAGACCTTTGGACTTTTGCAGTTGTTATTTTGGTGAATTTACACTTGGCCATGGATGTTGTCAGATGGTATTGGGTGACTCATGCTGTCATTTGGGGATCTATTCTTGCAACTTTCATCACTGTCATGATCATTGATGCTATACCCACACTTCCTGGTTACTGTGACATTCAGATTTCTAGAGAAGCTGAGAAGATGGAATATCAAAGAGTTGTTGAAAGTGAACAGATTGAAATGCTTCCTATCTCAGTTTCTCAACCAATATAA 3276 0.3941 MSIHSVSSGRNNSIKEVSFNHSGPKPVRYGSSKGADSDGLSLSQKELRDEDARLVYINDPEKTNETIEFSGNSIRTSKYSIITFIPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSIIPLAFVLFVTGVKDAFEDWRRHKSDKIENNRLASVLVNDKFIEKKWKDIRVGEIIKIKANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETGSKVPEKERINGLIKCEKPNRNIYGFQANMEIDGKKLSLGSSNIVLRGCELKNTSWALGVAVYCGRETKAMLNSSGAPSKRSRLETRMNSEIIILSFFLVALCTVTSVCAAVWLKRHKDELNLLPYYRKLDFSDGEVESYKYYGWGLEIFFTFLMSVIVFQVMIPISLYISMELVRVGQAYFMIEDNKMYDEETNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSATKASIEDEQVEYSVQVDGKVLRPKMKVKVNPELLHLSRRGLENKEAKRIHDFFLALATCNTIVPIVVDTPDPDVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHVVIDIQGERKKLNVLGLHEFDSDRKRMSVILGYPDNSVKAFVKGADTSMLSVADKSLYMNLIRATEAHLHSYSSLGLRTLVIGMRELNVSEYEQWHTAYEAASTALFGRAALLRKISSNVENNICILGASAIEDKLQKGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQVIINSNNKASCRKCLDDALVMSKKLKSTSGNNTRGSSDAVTTQIALIIDGGSLVHILDSELEEQLFHLASKCSVVLCCRVAPLQKAGIVSLVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRNAVLVLVLFWYVLYTAFTLTSAINEWSTTLYSIIYSSLPTIIVGILDKDLGRRTLLKYPQLYGAGQRHEAYNKKLFLLTMADTLWQSMAIFWPPLFAYWSSNIDVASIGDLWTFAVVILVNLHLAMDVVRWYWVTHAVIWGSILATFITVMIIDAIPTLPGYCDIQISREAEKMEYQRVVESEQIEMLPISVSQPI 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi764g00023 1091 Pfam Phospholipid-translocating ATPase N-terminal 55 120 IPR032631 -
Sebi764g00023 1091 SUPERFAMILY Calcium ATPase, transmembrane domain M 69 1055 IPR023298 -
Sebi764g00023 1091 CDD P-type_ATPase_APLT_Dnf-like 71 987 - -
Sebi764g00023 1091 SFLD Haloacid Dehalogenase 423 898 - -
Sebi764g00023 1091 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 445 712 IPR023299 GO:0000166
Sebi764g00023 1091 Gene3D - 544 676 IPR023299 GO:0000166
Sebi764g00023 1091 MobiDBLite consensus disorder prediction 1 41 - -
Sebi764g00023 1091 MobiDBLite consensus disorder prediction 1 19 - -
Sebi764g00023 1091 FunFam Phospholipid-transporting ATPase 127 296 - -
Sebi764g00023 1091 SUPERFAMILY HAD-like 426 893 IPR036412 -
Sebi764g00023 1091 Gene3D - 695 894 IPR023214 -
Sebi764g00023 1091 FunFam Phospholipid-transporting ATPase 543 676 - -
Sebi764g00023 1091 FunFam Phospholipid-transporting ATPase 695 896 - -
Sebi764g00023 1091 SFLD p-type atpase 423 898 IPR044492 -
Sebi764g00023 1091 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1054 IPR032630 -
Sebi764g00023 1091 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 894 1050 - -
Sebi764g00023 1091 Gene3D - 133 296 - -
Sebi764g00023 1091 SUPERFAMILY Calcium ATPase, transduction domain A 152 293 IPR008250 -
Sebi764g00023 1091 NCBIfam phospholipid-translocating P-type ATPase 69 895 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Sebi764g00023 1091 PRINTS P-type cation-transporting ATPase superfamily signature 439 453 - -
Sebi764g00023 1091 PRINTS P-type cation-transporting ATPase superfamily signature 856 875 - -
Sebi764g00023 1091 ProSitePatterns E1-E2 ATPases phosphorylation site. 441 447 IPR018303 -
Sebi764g00023 1091 Pfam E1-E2 ATPase 155 396 - -
Sebi764g00023 1091 Pfam Cation transport ATPase (P-type) 542 623 - -
Sebi764g00023 1091 NCBIfam HAD-IC family P-type ATPase 827 900 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi764g00023 1091 NCBIfam HAD-IC family P-type ATPase 371 460 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi764g00023 Sebi-Chr764 292666 297855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi764g00023 5 1060 Primary Pumps ATPases AT5G04930 67.989 0.0 1546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi764g00023 K14802 - gmx:100813982 1753.41