Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi764g00019 ATGGTGCCCTTTGTTTTGCCTCTTCTATTCTTCTCATTCTTAGTGGGGAATTCGAAAGAACAACTCCAAGTGGGTTTCTATTCCAACACATGTCCTCAAGCAGAGCCCACTATTCATGTTGTTGTTAGAGATGTTGTTCTCTCTGAGCCTAACATGGCTGCTATCTTGCTCAGGCTTCAGTTTCATGATTGCTTTGTTGAGGGATGTGATGGTTCAATTCTGATCGACAATGGTCCACAATCAGAGAAACTAGCATTTGCACATCAATGGGTTAGGGGGTTTGGAGTAATAGAAAGAGCCAAGGCACAATTGGAAGCATCTTGCCCAGGAGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCCAGAGATGCCATAGTCATGGCAAATAGACCAGGATACCAAGTTCCAACGGGGAGGAGAGAAGGGTTGGTTTCTAATCTTTCACTTGAAACTGATATGACATATGTTGATGATTCAATTCAACTACTCAAGGACAAGATTCTGAAGAAGGGTCTCACAGAGAAAGACCTTGTCCTTCTCAGTTGTCAAGAGGTTCATGTCCCGGCTGAATTTGATTGGCAGATGCTTGATAAATCCAAGTTTTTCTTCCTTGGTGCTGCTATTTTCTCTGGGGTTTCTACAACCCTATACCCTGTTGTTGTGTTGAAAACCAGGCAGCAAGTGTCTCAGTCACAAGTTTCTTGTATGAAGACTACATTGCCATTGATTAGGGGTAAAGGTTTTAGAGCATTGTACTGTGGGTTTGGGAATTCTTTGACGGGTACAATACCTGCCAGAGCACTGTAA 810 0.4333 MVPFVLPLLFFSFLVGNSKEQLQVGFYSNTCPQAEPTIHVVVRDVVLSEPNMAAILLRLQFHDCFVEGCDGSILIDNGPQSEKLAFAHQWVRGFGVIERAKAQLEASCPGVVSCADIVALAARDAIVMANRPGYQVPTGRREGLVSNLSLETDMTYVDDSIQLLKDKILKKGLTEKDLVLLSCQEVHVPAEFDWQMLDKSKFFFLGAAIFSGVSTTLYPVVVLKTRQQVSQSQVSCMKTTLPLIRGKGFRALYCGFGNSLTGTIPARAL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi764g00019 269 ProSiteProfiles Plant heme peroxidase family profile. 21 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 Pfam Peroxidase 41 183 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 FunFam Peroxidase 25 166 - -
Sebi764g00019 269 PANTHER PEROXIDASE 25-RELATED 11 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 Gene3D Mitochondrial carrier domain 166 269 IPR023395 -
Sebi764g00019 269 SUPERFAMILY Mitochondrial carrier 195 268 IPR023395 -
Sebi764g00019 269 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Sebi764g00019 269 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 SUPERFAMILY Heme-dependent peroxidases 21 183 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi764g00019 269 Gene3D - 21 165 - -
Sebi764g00019 269 Pfam Mitochondrial carrier protein 206 269 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi764g00019 Sebi-Chr764 236172 237383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi764g00019 6 182 Peroxidase AT4G25980 64.407 9.01e-78 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi764g00019 K00430 - gmx:547549 275.789