Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi764g00011 ATGAAGGTCACGTGGATACGTTTGATCAGAGGAGAAGGAGTTGTGGCAAGGTGGGTGCAGGGCAAACACTTGGCATACGCATTTGGAAGTGAAATCAACTGTCTAGGTATTGTTTGTATTGGTGGCATATGTGGTAGCATTATTGAAAGCAGACGGAAAAGGGAAGGGAAAAGAATAAGCTCAGGTCCAAAAAAGCGCGAAGCAAAACCAGAAACTAGATGTGAATGCCTTGCAATGTTTTGTGTTCGAAAAGAGTTATTGAGTGGGGGATGGTATGTGAAAATCTTCAATGATGATCACAATCATGACATGCTTGAAAACAAGTATTGTGGGATGATGACAGTTCACCGGAAAATGACCGAGTCTGACACAATGGAAATGAACAGTATGAGAAGTGTTGGGATATCTGTTCCTGATATATATGCCTCTTTTGCTAGTCGGTCTGGAGGCTATGAAAAGGTTGGGTTCCGCAAAAAGGATATGTACAATCAAATTGACAAACAACGACGGTTTCAAAGGTCTGATGCAAAAACTGTGCTAAGGTTTGTAAAATCACGGTATAGCCTAACTGTATTTGTTCAACACTTCCAGCGGTCCCTTTGTTACATGAGGTATAAAGAAGAGGAGGATGATTTTGCATCTATGTTGGGTGATGTTGTGTTAACAACAAACTTGCAGCCGTTGGAACGGTCGGCATCAAGGCACTTCACAAGAAAGATCTTCCTATTGTTTCGTAGAGTGTTATTTCGGGCTAGCCAGAATTTTGTTGTCCATTGTAGGCAGTCAACCATGTGGATGATTTACACAGTTAAGAGGTACCAAAGTGGTGGCAAAGAATGGTATGTGTCACTCTATCCACCTTCAAATGATTTCAAATGTTGTTGCCAGCGAATGGAATCGTATGGGTTGTCGTGCCCACACATCATATCTGTGTTGGTTTACCTTGACTATGCAGAGATTCCTCCATGTCTAATACTTCAAAGGTGGACGAAACGTGCTAAAGAATCTATCCGCCACATACTGATTGCAAGCACTCACTATTGGGACTCATCCTTGATTGCTCGATATTCTTCACTGCTAGAGCAATGCAGACAAATGTGTAACCTGGCTGCACGGTGTGATGAAGATTTTAACTGTATTAAAGAGTGGATAAATTCTGAAATCCAAAGGTTGAAATATAAATATGGGGATAGGATTTTTGAGCAAGATGCAGATTTGGATGGGCTGGATAGTGGTGTGCTTGATCCTGTTCGCGTTAGAACAAAAGGTTGCCCTAGAGCCTCAAGTAGTGTTCCTAGTAAAGGTAGGCGAAAGAACAAGTGTAGCAGGTGTGGCAGATTGGGTCATAATAAAAAATGTTGTCCTCAAACTCGCATGTTACAACCTGCTGCCACCCCTTGTGGGATGGGTGGTCAAGAGGTGGGAAGTCAAAGTACATTTGATCTATATGTGGACTTGCATTGTGGCTCTCCACAGATTGGACAAAGTCAAGTCAACTCTCAGGCCGAGGAAGGATGTAGTAATGGGCGTGGAATTTGA 1539 0.425 MKVTWIRLIRGEGVVARWVQGKHLAYAFGSEINCLGIVCIGGICGSIIESRRKREGKRISSGPKKREAKPETRCECLAMFCVRKELLSGGWYVKIFNDDHNHDMLENKYCGMMTVHRKMTESDTMEMNSMRSVGISVPDIYASFASRSGGYEKVGFRKKDMYNQIDKQRRFQRSDAKTVLRFVKSRYSLTVFVQHFQRSLCYMRYKEEEDDFASMLGDVVLTTNLQPLERSASRHFTRKIFLLFRRVLFRASQNFVVHCRQSTMWMIYTVKRYQSGGKEWYVSLYPPSNDFKCCCQRMESYGLSCPHIISVLVYLDYAEIPPCLILQRWTKRAKESIRHILIASTHYWDSSLIARYSSLLEQCRQMCNLAARCDEDFNCIKEWINSEIQRLKYKYGDRIFEQDADLDGLDSGVLDPVRVRTKGCPRASSSVPSKGRRKNKCSRCGRLGHNKKCCPQTRMLQPAATPCGMGGQEVGSQSTFDLYVDLHCGSPQIGQSQVNSQAEEGCSNGRGI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi764g00011 512 PANTHER OS01G0519700 PROTEIN 186 452 - -
Sebi764g00011 512 Pfam FAR1 DNA-binding domain 56 105 IPR004330 -
Sebi764g00011 512 ProSiteProfiles Zinc finger SWIM-type profile. 268 316 IPR007527 GO:0008270
Sebi764g00011 512 ProSiteProfiles Zinc finger CCHC-type profile. 440 456 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi764g00011 Sebi-Chr764 69363 72782 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi764g00011 FAR1 4.4e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi764g00011 - - tpra:123913749 223.402