Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi764g00002 ATGTCTTCACTTGCAAAGCCCAATGACCCATTTGCCTTGCAAATGGTGTTCATTGATGAAGAGGGTGGGAGGATAGAGGCCACCGTGCCGAAGCACCTGATAATGAAATTCTCGCAGGCTGTGGCTGAGGGTGAGGTTTATAGGCTGTCGAATTTTGGTACGACAGCGAATTCTGGAAAGTTTCGGGCCGTAAACCACGAATATAAGCTCGTGTTCAATGGAGCCACGAAATTGGTTCCTTGTCCTTCTGTCACCATCCCGTTGTCTGGGTTATCTTTGCTGAAGACTTCAGACATTAACAAAACTAATGGTTCTTCTAATTTCCTCTTAGATTTCATGGGGGTTCTCACGACTGTTTCAGAGGAGCTGACCATGAACAAGCAAGGCAGAGAGACAAGGATGATGCTGCTTGATTTAGTTGATGAAATGGGATCCATAAGGTGTGCAATATTCGGAGATACAGTTGAGGTTGTAGCTGGGTTTCTCACCCTCCCAAGAGACGGGCTGCCGAGTTTGAATGGTTCAAGATGCCAAGTGGGCATTCAAAATGTAATGAACGCCACTAAGTTTTACTGGAATCCTACCTTACCAGAGGCAATTGAGTTTAAGAATGGCCTTGCTGGGCATGAAATAGAGACTGAAGTTGCTATTGGTTCCATTAGCGAGAGATCTCGACAAGTGTCCATGAAAGAAGAGTTCCTCTTTATTTATCCTAGAAAGTCTGTTGGAAAACTCAGCCTTACCAATGAGGATGGATGCTCCATTGTTCTGGGTGTGATTGATGAAGTGCTACAGGAGGATCATTGGTGGTACATGGCATGTACATGCATGAAAGCTTTATCATTTGATTACACATTACCTTACTGTCGGGATTGCAACAAAGTCCTGTTTGAAATTAACCCAAGGTTCAAGATCAAATTGCTGGTGACAAATGGAGATAATTGTGTTCAGTTCATCATGTGGGACTCAGAATGCTTCTCTTTACTGAACAAAACTTGTAGACAATTGTTATCTGAGATTAAGGGGGACCCAACTGAGTGCTACCCTTCTGAAATAATGGATCTAACTGGTCAGGAATTTCTATTTCGAGTAGAGAGAAAGAATGATCCAATGTTTGCCTTTGATGAATCTTATATTGTCAGGAGGGTGTGTACTGATCCAAGTGTTATTGAAGAGTTCAAAAGTGGAGTAGAGGAAGAGACTCTATCAAAGAATAAATTGCTCCTGCTTTCACCAAACTGGGAGGTTGCGAAACAAGTGCTTGTGTGCTTGACCTTTCACCTCAATGCAACTCTGTGGTTACTAACACTAATGTTAGCCAAAAATCATGCACCCCATCCACAAATCAACCTGAGGAGAGCGTTGCTGAACATAAAAGGCAAGGTGAGGCAGTAA 1395 0.4301 MSSLAKPNDPFALQMVFIDEEGGRIEATVPKHLIMKFSQAVAEGEVYRLSNFGTTANSGKFRAVNHEYKLVFNGATKLVPCPSVTIPLSGLSLLKTSDINKTNGSSNFLLDFMGVLTTVSEELTMNKQGRETRMMLLDLVDEMGSIRCAIFGDTVEVVAGFLTLPRDGLPSLNGSRCQVGIQNVMNATKFYWNPTLPEAIEFKNGLAGHEIETEVAIGSISERSRQVSMKEEFLFIYPRKSVGKLSLTNEDGCSIVLGVIDEVLQEDHWWYMACTCMKALSFDYTLPYCRDCNKVLFEINPRFKIKLLVTNGDNCVQFIMWDSECFSLLNKTCRQLLSEIKGDPTECYPSEIMDLTGQEFLFRVERKNDPMFAFDESYIVRRVCTDPSVIEEFKSGVEEETLSKNKLLLLSPNWEVAKQVLVCLTFHLNATLWLLTLMLAKNHAPHPQINLRRALLNIKGKVRQ 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi764g00002 464 Gene3D - 5 83 IPR012340 -
Sebi764g00002 464 CDD RPA1_DBD_A_like 8 77 - -
Sebi764g00002 464 Gene3D - 85 213 IPR012340 -
Sebi764g00002 464 SUPERFAMILY Nucleic acid-binding proteins 9 84 IPR012340 -
Sebi764g00002 464 SUPERFAMILY Nucleic acid-binding proteins 92 206 IPR012340 -
Sebi764g00002 464 Gene3D - 222 385 IPR012340 -
Sebi764g00002 464 SUPERFAMILY Nucleic acid-binding proteins 246 370 IPR012340 -
Sebi764g00002 464 Pfam Domain of unknown function DUF223 15 84 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi764g00002 Sebi-Chr764 18494 20805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi764g00002 17 311 Core DNA Replication Machinery Family AT2G06510 22.050 2.33e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi764g00002 - - lja:Lj6g3v0884310.1 307.375