Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi762g00016 ATGAGTATAAATGATGTGGATGACATCCGTAAAATTGATTTGGTAAACATTACTTGGGAGAAGGTGGGTAGGTGTGTGTTTTCGGACTTGGAAGTTGCTTATCAATTCTATTGTAAATATGCAAGAAGAAAGGGTTTTGCTGTTCGAAAAGGAAAGGTGGTAAAGAACAGTAAAGGGGAAATTGTACAACGAACACTTTTTTGCAACAGGCAAGGGAAAAGAACAAGCTCAGGAACCAAAAAGCGTGAAGCAAAACCAGAAACTAGATGTGAATGCCTTGCATTGTTGTGCGTTCGAAAAGACTTAATGAGTGGGGGATGGTATGTGAAGATCTTCAATGATGATCACAATCATGACATGCTTGAAAACAAGTATTGTGGGATGATGCCAGCTCACCGAAAGATGACGGAATCTGATATAATGGAAATGAAAAGTATGAGAAGTGTTGGGATATCTGTACCTGATATATATGCATCATTTGCTAGTCGTTGTGGTGGGTATGACAAGGTTGGTTTTCGCAAACAAGATATGTACAATCAGATTGACAAACAACGGCGGTTTCAAAGGTCTGATGCAAAATCTGTGCTAAGGTGTATGTTTGCTCATGTTGAAGTTGCTGAATTTTGCCGGCGGTGGAGAGACATGGTTTGTAAGTTTAAGTTAGAGGATAACAATTGGGTTAAAGATCTTTATGAGAAGAAGCATATGTGGGCCACGGCATATATAACAGGTCAATTTTTTGCGGGTTTGCGGACAACTTCCCGGTGTGAGAGTTTGCATGGTCAACTTGGAAGGTTTATAAAATCGCGATATAGCCTAACTGAATTTGTTCAACACTTCCAGCGGTCCCTTTGCTACATGAGGTATAAAGAAGAGGAGGATGATTTTGCATCTATGTTGGGTGAGGTTGTGTTAACAACAAACTTGCAGCCTTTGGAACGGTCCGCATCAAGGCACTTTACAAGGAAGATCTTCCTACTGTTTCGTAAAGTGTTATCTCGGGCTACCCAAAACTTTGTTGTCCATTGTAGGCAGTCAGCCATGTGGGTCATTTACACAGTTAAGAGGTATCAAAGTGGTGGAAAAGAATGGTATGTGTCACTGTACCCACCTTCAAATGATTTCAAATGTTCTTGCCAGCGAATGGAATCATATGGGTTACCGTGCCCACACATAATAGCTGTTTTGGTTTACCTTGACTATTCAGAGATTCCTACTTGTCTAATACTTGAAAGGTGGACCAAACGTGCTAAAGAATCCATCTGTCATATACTAATTGCAAGCTCTCACTATTGGGACTCATCCTTGATTGCCCGGTATGCATCCCTGCTAGAGCAATGCAGACAACTGTGTAACCTGGTTGCACGGTGTGATGAAGAGTTTAACCGTATTAAAGAGTGGATAACCTTTGAAATCCAACGGTTGAAAGATAAATATGGGGATGGTATTTTTGAGCAAGAGGGAGATTTGGATGGGCTGGACAGTGGTGTGCTTGATCCCGTTCGCGTTCGAACAAAAGGTTGCCCTCGTGCCTCTAGTAGTGTTCCTAGTAAAGGTAGGAGGAAAAACAAGTGCAGCAGGTGTGGCGGATTGGGGCATAATAAAAAATGTTGTCCTCAAACACCCATTGGAGAAACTTCTTGCGCGGCTTGTGGGATGGGTGGTCAAGAACTGGCAAGTCAGAGTACATTTGATCTATATGTGGACTTGCATTGCGGCTCTCCTTTGATTGGGCTAAGTCAGGTGAACTATCAGAGTGGGGAAGGATGCAGTAATGCACGTGGATCTTGA 1791 0.4227 MSINDVDDIRKIDLVNITWEKVGRCVFSDLEVAYQFYCKYARRKGFAVRKGKVVKNSKGEIVQRTLFCNRQGKRTSSGTKKREAKPETRCECLALLCVRKDLMSGGWYVKIFNDDHNHDMLENKYCGMMPAHRKMTESDIMEMKSMRSVGISVPDIYASFASRCGGYDKVGFRKQDMYNQIDKQRRFQRSDAKSVLRCMFAHVEVAEFCRRWRDMVCKFKLEDNNWVKDLYEKKHMWATAYITGQFFAGLRTTSRCESLHGQLGRFIKSRYSLTEFVQHFQRSLCYMRYKEEEDDFASMLGEVVLTTNLQPLERSASRHFTRKIFLLFRKVLSRATQNFVVHCRQSAMWVIYTVKRYQSGGKEWYVSLYPPSNDFKCSCQRMESYGLPCPHIIAVLVYLDYSEIPTCLILERWTKRAKESICHILIASSHYWDSSLIARYASLLEQCRQLCNLVARCDEEFNRIKEWITFEIQRLKDKYGDGIFEQEGDLDGLDSGVLDPVRVRTKGCPRASSSVPSKGRRKNKCSRCGGLGHNKKCCPQTPIGETSCAACGMGGQELASQSTFDLYVDLHCGSPLIGLSQVNYQSGEGCSNARGS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi762g00016 596 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 174 IPR031052 GO:0006355
Sebi762g00016 596 Pfam FAR1 DNA-binding domain 35 121 IPR004330 -
Sebi762g00016 596 ProSiteProfiles Zinc finger SWIM-type profile. 352 400 IPR007527 GO:0008270
Sebi762g00016 596 Pfam SWIM zinc finger 376 398 IPR007527 GO:0008270
Sebi762g00016 596 ProSiteProfiles Zinc finger CCHC-type profile. 524 540 IPR001878 GO:0003676|GO:0008270
Sebi762g00016 596 SMART 26again6 375 402 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi762g00016 Sebi-Chr762 404915 407275 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi762g00016 FAR1 2.8e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi762g00016 - - tpra:123884554 323.553