Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi762g00015 ATGGGTTCATCTTTAGACGACTCATCTATCACGGGTGTGATGAACAAGGAGGAGAAAGAAGAATTTGTTGGGCAAATTGAAATATGGAAGTACATGTTGTGCTTCACAGACTCTTTTGCACTAAAATGTGCTGTGGAACTGCGCATAGCTGACATAATAGACCGTTATGGTAAACCACTGTCTTTGTCTCAAATTGCAGCGAACATTGAAGATGCACCCTCCCCTGAAGTTTCCATGCTGCAAAGAATCCTGACAGTGATGGTGCGGAGAAAGATCTTTAGTGCAGAGAAGTCAGAGAGCGGAGAGACTCTTTATGGTATGACACATGCTTCAAAATGGATCCTAAGGGACACCAAAATGACATTAGCACCTTTGGTGTTGCTAGAGAACCACCCAATCCATTTGAACCCTGCTCACTATATTAGTGACTGTGTCAGGGAAGGTTACAAAAATGGCACTCCTTTCTTTAGGTGCCATGGCCATGATCAATTTGAATTGACAGGGGTGGACGCGGATTTCAATAGGTTATTCAATGAGGGTCAAGTTTGTACGGCCAGGATTGTGTCCAAGGCTGTGATCTCAGGATACAAAGATGGGTTCAAGCAGATTGAATCATTGGTTGATGTTGGAGGTGGTATTGGGGGTTCACTCTTTGAGATTGTGAGAGCCTACCCACACATCAAAGGCATTAACTTTGACTTGCCTCATGTCGTTGCCACTGCACCCAAGTACGATGGAATCACCCATGTTGGAGATCCGGAAGGGAATGAACCATTTACTGACGCTGGTATTGCGTTTGATATGTTGCTGCTTGCACACAACGCGGGTGGAAAGGAAAGGACCGCGGAGAATTGGAAAATTCTATTCAAAGATGCAGGATTCGCGCGTTATAACATCATCAAGATCAATGCCATGCCATCCATCATTGAGGCATTTCCAATCTAA 945 0.4444 MGSSLDDSSITGVMNKEEKEEFVGQIEIWKYMLCFTDSFALKCAVELRIADIIDRYGKPLSLSQIAANIEDAPSPEVSMLQRILTVMVRRKIFSAEKSESGETLYGMTHASKWILRDTKMTLAPLVLLENHPIHLNPAHYISDCVREGYKNGTPFFRCHGHDQFELTGVDADFNRLFNEGQVCTARIVSKAVISGYKDGFKQIESLVDVGGGIGGSLFEIVRAYPHIKGINFDLPHVVATAPKYDGITHVGDPEGNEPFTDAGIAFDMLLLAHNAGGKERTAENWKILFKDAGFARYNIIKINAMPSIIEAFPI 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi762g00015 314 Pfam Dimerisation domain 40 88 IPR012967 GO:0046983
Sebi762g00015 314 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 311 IPR029063 -
Sebi762g00015 314 Gene3D - 11 114 IPR036388 -
Sebi762g00015 314 Gene3D Vaccinia Virus protein VP39 252 314 IPR029063 -
Sebi762g00015 314 PANTHER O-METHYLTRANSFERASE 25 251 IPR016461 GO:0008168
Sebi762g00015 314 SUPERFAMILY "Winged helix" DNA-binding domain 20 117 IPR036390 -
Sebi762g00015 314 Gene3D Vaccinia Virus protein VP39 116 251 IPR029063 -
Sebi762g00015 314 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 314 IPR016461 GO:0008168
Sebi762g00015 314 PIRSF O-mtase 7 255 IPR016461 GO:0008168
Sebi762g00015 314 PIRSF O-mtase 252 314 IPR016461 GO:0008168
Sebi762g00015 314 Pfam O-methyltransferase domain 140 244 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi762g00015 Sebi-Chr762 389014 390751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi762g00015 39 300 Monolignol Biosynthesis Gene Families AT5G54160 30.721 2.62e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi762g00015 K22588 - gmx:100800801 493.426