Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi762g00011 ATGGGTTGTTGTGTCTCAACAAGCAGTAGAAGTACTTGTAGCAGCAGGAGCAATGGAGAGGTGCTCTCTCCATCTTGCTTAGAAATTGGATTCTGTGGGCAGAAGAGGGCAAGGAGAACATTCTCTGATCATGTTATTTCTCTGCACCATTTACCATCCTTACCCAGCAGAATTTTCACTAATGGAAAGAGCCGGTCTTCATGCATATTCACGCAGCAAGGCCGCAAGGGTATTAATCAGGACGCCATGGTTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTCTTTGATGGTCATGGTCCACATGGTCATCTTGTTGCACGCAAAGTGAGGGATACATTGCCTGTAAAACTACTTTCATTTTTGCATTCTGGTGAATCGAAGCGAAAAGGGTCAGGTAAAGCTTGCTTCAAAGGGAATGTAAAACCTGACAGTGGAGACTCTGAGGATTGCTCTGCTGAGGAGAAACTGAACTCTAAATGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCAAATCTGGATTGCTTCTGTAGCGGGAGCACAGCTGTGTCAATAGTGAAGCAGGGTTCAAACCTGTTCATGGGCAATATTGGGGATTCTCGAGCAATCATGGGATCCAAGGACAGCAATGACGCCATGGTGGCAGTTCAGTTGACTGTCGATTTGAAGCCTGATTTGCCAAGAGAAGCAGAAAGAATTAAGCGTTGCAAGGGTAGGGTATTTGCACTGCAAGATGAGCCAGAAGTGCCTAGGGTATGGTTGCCTTTTGATGATGCTCCAGGATTAGCAATGGCTAGAGCATTTGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCTATACCTGAATTTTCTCACCGGCTGCTTACAGACAGAGATCAGTTCATTGTTCTTGCCTCAGATGGGGTCTGGGATGTTTTAAGCAATGAGGAAGTGGTTGAGATAGTATCTTCAGCACCAACAAGATCATCAGCAGCTAGGATTCTGGTAGATTCTGCTGCTAGAGAGTGGAAACTTAAATACCCAACTTCAAAGATGGATGACTGTGCTGTAGTTTGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATAATGAGGAACAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCAGGTAATCCAATTGAGTCAGATGATGGACAAAAATCTGAGCCATCTTTGCAAAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACTACTAATGGAGGAGCACTATCTGTTGATGTTGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTTACAAAAGTATCCTTTTGGATTCAACTCCATGGATTCCCATTGGACCTGCTGAATACCAAGACTGCTGCCAAGAACATCAGTCGTTTTGGTGAAGTCCTAGAAGTGGAAAACCCTGAAGTGGAAGGCCATGAACAGAAAGTTTGCTCAAAAGAGAAAGTCATGTCCGCTATTGATCCAAAAATCCCCAGATTCAATGCAAGATTGGGCGTTCCACCAGCTAAAACAATATTATCCATTGCTCAAGAACAAAGTTTTTGGAGGGTTAAAGAAACCCAGAAGGAGAAGGTAGATTCCAGCCCGCACAACCAAAAAGGGAAAATGGTGGCGGACGTGGATGTACCAACAGTACGGAATATGAGGTTTTGTAGCTGTGAGGTTAGTCCACTGATTCTCCAACATCATGGTAAAGCGCATACACAGGATGCAGGAACTGGCCCACATAATCCCCAACCTGTCCAAACCCGTGTTCCTAAAGAGAAGGCAAATGAAGATAGCACCCTTGTTTCTAATGCTAGTGGGCCTTCGAATAGTAACCCCTCCACGGGCCCAAAAGGCGCTTCAGTCACTAAAATTGACCTTAAAGAAGGTAGAGTCATACCAGGTTTGGGCCCTGAAAACTTGGACCTGTTAAAAGTAGATACTGAATTCATTGGCCTCCGTAAAGACCCAGTGATAATGGACTTTCCTAGCCCACCTACAAACAGATATCAGGGAGCTAATCTGGATCCTACCCAGGTTCGCAAGTGTAGGAAATTCATTTCCAAAAAGAGCCCAATTACCAAACATAATTCAAGCCCAGGCTACTTTGTGGAGTTTCCTGATGATGAAGATGAAGACTCTCACCCCACTCACCCTCTAAAAATTCAGCAGGAGGAGGAATCTCAGCTTATCGTGGGGTGGAATAACTCTTTATCCTTAAAGAGGTATAGGGAGGAAGCCTTTGTGGATGCTACGTATCTCTTTGATGGGACTTGGGCACAACAAAAGAGAATTAAAACTCAGGATGTTGGAGAGGCTTTTATTCAGGAACTAGCTCATATGGAGATTTTGTACAATGAAGATCGCACCAAGGCTGGGGAGGCGGGCCTGAAGCTGCCCCACCCTTATCAATGA 2460 0.4447 MGCCVSTSSRSTCSSRSNGEVLSPSCLEIGFCGQKRARRTFSDHVISLHHLPSLPSRIFTNGKSRSSCIFTQQGRKGINQDAMVVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDTLPVKLLSFLHSGESKRKGSGKACFKGNVKPDSGDSEDCSAEEKLNSKWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVSIVKQGSNLFMGNIGDSRAIMGSKDSNDAMVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDNEEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETTNGGALSVDVEDGTSSADDQNWSGFTKVSFWIQLHGFPLDLLNTKTAAKNISRFGEVLEVENPEVEGHEQKVCSKEKVMSAIDPKIPRFNARLGVPPAKTILSIAQEQSFWRVKETQKEKVDSSPHNQKGKMVADVDVPTVRNMRFCSCEVSPLILQHHGKAHTQDAGTGPHNPQPVQTRVPKEKANEDSTLVSNASGPSNSNPSTGPKGASVTKIDLKEGRVIPGLGPENLDLLKVDTEFIGLRKDPVIMDFPSPPTNRYQGANLDPTQVRKCRKFISKKSPITKHNSSPGYFVEFPDDEDEDSHPTHPLKIQQEEESQLIVGWNNSLSLKRYREEAFVDATYLFDGTWAQQKRIKTQDVGEAFIQELAHMEILYNEDRTKAGEAGLKLPHPYQ 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi762g00011 819 MobiDBLite consensus disorder prediction 706 733 - -
Sebi762g00011 819 CDD PP2Cc 65 369 IPR001932 -
Sebi762g00011 819 MobiDBLite consensus disorder prediction 1 20 - -
Sebi762g00011 819 SMART PP2C_4 55 367 IPR001932 -
Sebi762g00011 819 SUPERFAMILY PP2C-like 58 371 IPR036457 -
Sebi762g00011 819 PANTHER PROTEIN PHOSPHATASE 65 367 IPR015655 GO:0004722|GO:0006470
Sebi762g00011 819 MobiDBLite consensus disorder prediction 612 634 - -
Sebi762g00011 819 ProSiteProfiles PPM-type phosphatase domain profile. 66 369 IPR001932 -
Sebi762g00011 819 MobiDBLite consensus disorder prediction 584 638 - -
Sebi762g00011 819 Gene3D - 58 371 IPR036457 -
Sebi762g00011 819 MobiDBLite consensus disorder prediction 377 442 - -
Sebi762g00011 819 MobiDBLite consensus disorder prediction 380 442 - -
Sebi762g00011 819 FunFam probable protein phosphatase 2C 52 57 372 - -
Sebi762g00011 819 Pfam Protein phosphatase 2C 97 346 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi762g00011 Sebi-Chr762 231823 237796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi762g00011 1 462 PP2C-type Phosphatase Gene Family AT1G03590 68.153 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi762g00011 - - gmx:100798340 837.41