Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi762g00003 ATGGCTTTAGTTTCTGCTGGTTATCACATAATCGAGAGTCTTTGCGGAAGAAGGCAGAACTGGAGATTGAAGGTGAAGCTCGTGAGGATGTGGAACATGGCGTCTGTTGCAACTCTAGATGATCCTTATGCTCTCCAGATATCGTTTGTTGATGAAAAGGGAGGTCGGATTGAGGGAACTGTTCAGAAGCACAACATGCTCAAATTTTCGCGACTCATGGTGGAAGGGCATGTGTATAAGGTTTCAAGGTTTGGAATTATCCAAAATGGAGGCAAGTTCCGTGCTGCTGGGCATGATTATAAAATCATATTCAACTCCAACACACAAGTCTCCCCCTGCAAAGAAGCCTCCATCCCGCACCCAGGGTTTGCATTCAGCAAAACATTTGATATCAAGAAGACGAAGGGATCTTTAGACTACTTATTGGACTTCATGGGAATGGTGACGGCTGTTTCGGGGGAGATACGATTAAACAAGGAGGAGAGGGTTACCCGTTTAGTGTTGCTGGACTTGGTTGAGGACATGACTTCCCGTGGTGATTATCCAGTTAGGCGTGTGTGTTGTGATAACTCCATATTGACTGAGTATACAGATTGTGTGGAGGATGAGACACCTCTCAAGCTCAAGTTTGCACCACTGTTTACCAAAATTCAACAAGAAGAAGGGAACAAGTGTGTCCTCTCACTCTCTCCGCAATGCAAAAGACTTCTAACAGATTCGGAGACAACCCCCTCTTCAGTTGGGCACTCATCATCTGCTGGTGTGGTGAGGCTGGTAGCAGTGGTTTTAAAGAGGAATGTTGAGGAGTCAGTTGATGAATCCTGGGAATTGAATAAGAGAGTAAGAGGGAAAGGTGTAAAGATTGAGGGCGATTAA 876 0.4521 MALVSAGYHIIESLCGRRQNWRLKVKLVRMWNMASVATLDDPYALQISFVDEKGGRIEGTVQKHNMLKFSRLMVEGHVYKVSRFGIIQNGGKFRAAGHDYKIIFNSNTQVSPCKEASIPHPGFAFSKTFDIKKTKGSLDYLLDFMGMVTAVSGEIRLNKEERVTRLVLLDLVEDMTSRGDYPVRRVCCDNSILTEYTDCVEDETPLKLKFAPLFTKIQQEEGNKCVLSLSPQCKRLLTDSETTPSSVGHSSSAGVVRLVAVVLKRNVEESVDESWELNKRVRGKGVKIEGD 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi762g00003 291 Gene3D - 9 116 IPR012340 -
Sebi762g00003 291 Pfam Domain of unknown function DUF223 48 115 IPR003871 -
Sebi762g00003 291 SUPERFAMILY Nucleic acid-binding proteins 7 116 IPR012340 -
Sebi762g00003 291 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi762g00003 Sebi-Chr762 82262 83670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi762g00003 11 178 Core DNA Replication Machinery Family AT5G45400 25.568 1.26e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi762g00003 - - mtr:11411000 117.087