Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi761g00020 GATGAGGCACTTCTAGCATCTTGGAAGCAACAACTGGATCGAGATGTTGAGACTCTTAAAATCATAGGAAATTTACATCAATTGCGCACGGTTTTGGGTCGTTGCGGAATGGAATGTAAAGGACTGGGGACCTTGTGCATTAAGGATCAGACACTCACAAATGAAAATGCAGAGAAGATAGTTGGTTGGGCTGTAAGCCATCACCTCATGCAGAACTCTGAAGCTGATCCTAACTCAAAGCTTGTATTATCGTGTGAGAGCATCGAGTATGGAATTGGGATCTTGCAGTCTATCCAGAATGAGTCCAAGAGCCTGAAGAAGTCTCTTAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTTTTGGGTGATGTGATTCCACCAAGTGACATTGATGTTACTTTTGATGATATTGGTGCTCTTGAAAATGTCAAGGATACACTGAAGGAGTTGGTGATGCTTCCTTTACAGAGGCCTGAGCTTTTTTGCAAAGGGCAACTAACCAAGCCTTGCAAGGGTATCCTATTATTTGGTCCCCCTGGAACAGGTAAAACAATGCTTGCAAAGGCAGTTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGCATTACATCTAAGTGGTTTGGTGAGGGTGAGAAATACGTCAAAGCTGTTTTTTCTCTGGCGAGTAAAATTGCTCCTAGTGTTATATTTGTTGACGAAGTTGACAGCATGCTGGGTCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGGAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGAACAAAAGATACTGAGCGAGTTCTTGTGCTTGCAGTCACTAACAGGCCTTTTGACCTAGATGAGGCTGTCATAAGGAGGCTGCCACGAAGATTGATGGTAAATTTGCCAGATGCTCCAAATAGAGCGAAAATATTGAAAGTTATTCTGGCAAAAGAGGAATTGTCTCCTGATGTTGATTTGAATGCGGTTGCAAATATGACTGATGGATATTCTGGAAGTGATCTTAAGAACTTGTGTGTAACTGCTGCACATCGTCCAATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACGTTCTGCTGCTACAGCAGAAGGTCGACCTCCCCCAGCATTATGTGGCAGTGGGGACGTTCGATCTTTAAACATGGAAGACTTTAAATATGCACATAAACAGGTATCTGCAAGTGTTTCATCTGAATCAGTAAATATGACTGAGCTTTTACAATGGAATGAACTGTATGGCGAGGGTGGTTCAAGAATAAAGAAAGCACTCAGCTATTTCATGTGA 1320 0.4205 DEALLASWKQQLDRDVETLKIIGNLHQLRTVLGRCGMECKGLGTLCIKDQTLTNENAEKIVGWAVSHHLMQNSEADPNSKLVLSCESIEYGIGILQSIQNESKSLKKSLKDVVTENEFEKRLLGDVIPPSDIDVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAVTNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEELSPDVDLNAVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERSAATAEGRPPPALCGSGDVRSLNMEDFKYAHKQVSASVSSESVNMTELLQWNELYGEGGSRIKKALSYFM 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi761g00020 439 Pfam ATPase family associated with various cellular activities (AAA) 175 304 IPR003959 GO:0005524|GO:0016887
Sebi761g00020 439 Coils Coil 95 115 - -
Sebi761g00020 439 SMART AAA_5 171 308 IPR003593 GO:0016887
Sebi761g00020 439 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 133 309 - -
Sebi761g00020 439 Pfam AAA+ lid domain 328 363 IPR041569 -
Sebi761g00020 439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 415 IPR027417 -
Sebi761g00020 439 MobiDBLite consensus disorder prediction 362 387 - -
Sebi761g00020 439 Gene3D - 307 401 - -
Sebi761g00020 439 Gene3D - 133 414 IPR027417 -
Sebi761g00020 439 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi761g00020 Sebi-Chr761 337627 341916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi761g00020 134 366 Calmodulin-binding Proteins AT3G56690 40.928 1.16e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi761g00020 - - gmx:100790427 802.357