Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi761g00010 ATGGCGGCAGGGCGAAAGAGTACTTTAAGGAGCAGGGAATCTTACAAATATAATTCCATCAAGGAATTTGATCACTGTAAGAATGTTTCTGCTGGCGTGGAAGTGGATGGTTTTCTTGGTGGAGAAGAGGAGAGAGAGGAAGGTGAGATCTTTGTTGAACATGGGGAATATGCACATGACCCAGGGTTTCAAGCTGTTGATGGGAAGGAAACTTTGCCACCGCCAGAGAAGAGGAGAAAAATTGATGTGCAAGGATGGAACATCACTATGTCAAGATGGGCTTGTGATGGTCTTTCACCAACAGGCACTGATGATAAATACAAGCAAGTCACAGGAACCTCAAGTCCTGAAGCTGATGAATCCCAAAGAGAATGTCCAGAGAGCACAATTACTAGATCATCAGGATCAGGAAGCAGCGGAAATTGTTCTCTGAGACTTTCTACGGAAGATACTGATTTTGACTTTATTGATGATGTTGAGGAAACCAAGGATAAGAAGACTGGAGAGATAGTAGCATTGAAAAAGGTGAAGATGAACATAGAGAGGGATGGTTTTCCAATGTCATCCTTAAGGGAAATAAACATTCTATTGTCTTTCAATCATCCCTTTATTGTGGATGTTAAGGAAGTAGTTGTGGATAATTATGATGGGACTTTCATGGTAATGGAGTACATGGAGCATGACTTGAAGGGACTTATGGAGCTTAAAAAACAACCTTTTAGTATGGGTGAAGTAAAATATATGATGCTTCAACTTCTTGAAGGTGTCAAGTATCTTCATGATAATTGGATTCTCCATAGGGACTTGAAGACATCAAATATTCTACTAAACAACAAAGGAGAGCTGAAAATATGTGACTTTGGGTTGTCAAGGCAGTATGGAAGCCCATTGAAACCATATACTCCTATTGTGGTTACACTGTGGTATAGAGCACCTGAACTTTTATTAGGTGCTAAAAAATACTCAACAGCAATTGACATGTGGTCGGTGGGTTGCATAATGGCTGAATTAGTTGCCAAGGAGCCTCTGTTCAGGGGTAAAACCGAAATTGAACAACTTCATAAGATTTTTCAAACCCTGGGTACACCAGATGAGAAAATTTGGCCAGGATTATCTAAATTACCGGGGTCTAAAACAAATTTTGTTAAGCAACCGTATAATATGCTAAGTAAGAAGTTTCCAGCTGCATCTTTCACTGGTTCACCAGTTTTATCTGAGTTGGGATTTGACTTGATGAAGAAGCTTCTAACTTACGACCCTGAAAAGAGGATAACTGCAGAAGATGCTCTCCTTCATGGTTGGTTCCGTGAAGCTCCACTTCCCAAATCTGATTTCAAGCCTGTTTTTTCTTGGCAGTGA 1359 0.4032 MAAGRKSTLRSRESYKYNSIKEFDHCKNVSAGVEVDGFLGGEEEREEGEIFVEHGEYAHDPGFQAVDGKETLPPPEKRRKIDVQGWNITMSRWACDGLSPTGTDDKYKQVTGTSSPEADESQRECPESTITRSSGSGSSGNCSLRLSTEDTDFDFIDDVEETKDKKTGEIVALKKVKMNIERDGFPMSSLREINILLSFNHPFIVDVKEVVVDNYDGTFMVMEYMEHDLKGLMELKKQPFSMGEVKYMMLQLLEGVKYLHDNWILHRDLKTSNILLNNKGELKICDFGLSRQYGSPLKPYTPIVVTLWYRAPELLLGAKKYSTAIDMWSVGCIMAELVAKEPLFRGKTEIEQLHKIFQTLGTPDEKIWPGLSKLPGSKTNFVKQPYNMLSKKFPAASFTGSPVLSELGFDLMKKLLTYDPEKRITAEDALLHGWFREAPLPKSDFKPVFSWQ 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi761g00010 452 Gene3D Transferase(Phosphotransferase) domain 1 227 447 - -
Sebi761g00010 452 MobiDBLite consensus disorder prediction 127 143 - -
Sebi761g00010 452 FunFam Cyclin-dependent kinase G-2 227 452 - -
Sebi761g00010 452 SUPERFAMILY Protein kinase-like (PK-like) 160 441 IPR011009 -
Sebi761g00010 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Sebi761g00010 452 Pfam Protein kinase domain 159 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi761g00010 452 ProSiteProfiles Protein kinase domain profile. 128 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi761g00010 452 MobiDBLite consensus disorder prediction 104 119 - -
Sebi761g00010 452 CDD STKc_CDC2L1 163 435 IPR045267 GO:0004674|GO:0005524|GO:0006468
Sebi761g00010 452 MobiDBLite consensus disorder prediction 97 143 - -
Sebi761g00010 452 PANTHER CELL DIVISION PROTEIN KINASE 158 441 - -
Sebi761g00010 452 MobiDBLite consensus disorder prediction 58 77 - -
Sebi761g00010 452 SMART serkin_6 128 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi761g00010 452 Gene3D Phosphorylase Kinase; domain 1 161 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi761g00010 Sebi-Chr761 166676 168570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi761g00010 159 441 Core Cell Cycle Gene Families AT5G10270 45.485 5.03e-78 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Sebi761g00010 Pkinase 8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi761g00010 K08818 - gmx:100788840 553.518