Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi75g00079 ATGAAGCGACCAAGAGACACGGGGGATTCCAGTTCTAGGGTTTCCCCTTCTCTTCAGGCAGGCATAATCAAGAGACTTCGATTGGAGAACTTCATGTGCCATTCCAACCACGAGACCGAGTTCGGAAGCCACGTCAATTTCATCACTGGCCAAAATGGAAGTGGCAAGAGTGCAATCCTAACTGCTTTGTGTGTTGCATTTGGTTGTCGAGCAAAAGGAACTCAAAGGGCATCCACTTTGAAGGATTTCATTAAAACTGGTGCCAGTAATGCTGTCATCCATGTTGAAATTCAAAATGAAGGAGAGGATGCTTTTAAGCCTGAAATATATGGTGGGGTTATCATTGTAGAACGTAGGATATCTGAATCTGCAACCTCTACTACCTTAAAAGATCACCAAGGAAAGAAAGTTTGTAGTCGGAAAGCAGATCTTCAAGAAATTATTGAACATTTTAATATTGATGTTGAGAACCCATGTGTAATTATGAGTCAAGACAAAAGCAGAGAATTTTTGCATTCGGGGAACAACAAAGATAAATTTAAGTTTTTTTACAAGGCCACGCTACTTCAGCAAGTCAATGATCTTCTGGAAAGCATTTCCAATGAATTAACTAGTGCACATGGAATAGTTGAAGAATTAGAAACTGCAATAAGGCCCATAGAGAAAGAGCTTAATGAGCTGCAGGTGAAAATTAAAACTATGGAGCATGTTGAACAAATATCCATAAAGGTTCAGCAGTTAAAAAAGAAACTTGCATGGTCATGGGTTTATGATGTCGACAAGAAACTCGAGGAACAAAATGCAAGGATTGAAATGTTGAAGAGCCGGATACCTATCTGTCAAGCTAAGATTGATCAACAACGGGATCAGATTGAAAAATTGAGGGAAAGCTGCTCTAAGAAGAAAGCTGAAATTGCAACTATGTTGGAAACGACATCACAAGTTAAGCAAATGAAGGAGAATTTAAGCCAGTTTTTGTCCTTGGCAAAAAAAGAAGCATTTGAACTTGGGCGAGATTGCAAATCCAAAACTAGCCACATACAGAAGATGGTACAGCAACGCAAAATGCTTGAACAACAAATGCATGATATTCATGAGCAGCATGCAAAAAATACTCAGGCTGAAGAATCTGACATGGCGGAGAAACTGAAGGGGCTTCAAGATGAAGTTCATGCTGCTGAATTAGAAGTGAAAAGTTTGAAAGAAGAAGAGGCTATGTTATTGAGCAGCATAAATAGGCAAAATGATGAAATAAGAAAGATTGCTGATGAGATCCAAGATCATGAAAAGAAGTATGAACGTAACATGCATAATATTCGTGATCTGCAACAACAACAAAGCAACAAGATTACTGTTTTTGGAGGAGATAAAGTATTGCATTTGTTACGAATAATTGAGAGACGTCATCAAAGGTTTAATATGCCTCCAATTGGTCCAATTGGTGCCCATCTGAAGTTGCTTAATGGTAATAAATGGGCGGTTGCCGTTGAACATGCCATTGGGAGATTGCTCAATTCCTTTATTGTGACTGATCACAAGGATTTTCATCTTCTGAAACAATGTGCAAAGGAAGCAAACTGTGGTTACCTTCGAATTATTATTTATGATTTTTCAACCCCAAGATTGACGATACCACAGCACATGCTTCCTGATACAGAACACAACAACTCATTCTGTCTTACAATAAGCAAAAATGTGGGAAATGTTGAGAGACAAGTGCTCGTTAACGATTATGATATTGGAAAAGCGGTTGCCTTTGATCAAAAGATCCCAAATCTGAAGGAGGTCTATACAGTGAAGGGATGCAGAATGTTTTCTCGAGCTAAGGTGCAGACTGTTCTTCCTCCAAGCGGGAGGCGTGGCCGTCTAAGTAGTTCTGTCAAAGAGGATATTGAGAAATTTCATAATGAAGCATCTGATGAACAAAAGGCAGCTAATGAATGTAAAAGGAATAAAAGAGAGGCAGAGATCAAGCTGGGGGAGCTTGACAGGAATATGAATTCTATAAAGAGGCGTTGTATAAATGCTGGTAGAAGTCTTACTTCTAAGAAGATAGCTTTGGAAGAGGCCATGCATCAGCATGCTGCTGAAAGAAGTCAAGAAAAAATAAAAGAAGAGCATGTCTTGTTGGAAGGCCTTGAGCAGAGGAGGCTTGAAGCAGTAGGAAAAGAAGATGATCTTAAAGTAAAATTTGACAAACTGTGTGAATCAACGAAAGGGGAAATTTCTGCCCTTGAGAAAGCCGAGAGTGAACTTATGGAGGTTGAAAGAGAAATGGATTCGGCAAATGAGGAGAAGAATCATTATGACGGTGTCATGAAAAACAAGGTTCTACGTGATATTAAGGAGGCAGAGGAACACTATCTGGAGCTTACAAAGACGCATTCTTCTTTGGGAAAGATTTGGACATCAGAAAACCTGATGATCCGTAGGAGCATGTTTGAGATGGAAGCCGAGGTCATTGACTGGTTAACTGGATTGATTGCCATGTACTCTGAATCAATTGATGATCTTAGGATGCTGTATGCGAAAAAAGAACGGAAGATCATGAAAAGACAGCAAGTTTACAAAGCCCTTCGACAGAAATTGGATGCTTGCCAGAGAGCCTTACTGTTACGAAGGAGCAAGTTTCAGAGAAATGCAACTTATCTGAAGCACCAACTTTCTTGGAAATTTAATGGCCATTTGAGAAAGAAGGGGATCAGTGGACTTATCAAAGTTAATTATGAAGAGAAAACCTTATCGATTGAGGTACAGATGCCCCAAGACGCATCAAACAGAGCTGTCCAAGACACCAGGGGTCTTTCAGGTGGGGAGCGTTTTTCAACATTGTGCTTTGCATTAGCCCTTCATGAAATGACAGAGGCCCCTTTTAGAGCAATGGATGAATTTGATGTCTTTATGGATGCAGTAAGCCGAAAAATCAGCTTGGACACTCTAGTTGATTTTGCTGAGGCACAAGGATCCCAATGGATATTCATCACCCCGCATGATACTAGCATTGGACTAGGCTCGAGGAGGCAAAGCCGATTAGGGGGTCTCCGGTTGAAATCGGGCCCGGCGGCAGCAGCAGCGGAAAACAGCCGAAAAAAGCACGACAACGAGGAGATGGAGGCAGAGCACACCATCGGAAAATAG 3138 0.4073 MKRPRDTGDSSSRVSPSLQAGIIKRLRLENFMCHSNHETEFGSHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGASNAVIHVEIQNEGEDAFKPEIYGGVIIVERRISESATSTTLKDHQGKKVCSRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISNELTSAHGIVEELETAIRPIEKELNELQVKIKTMEHVEQISIKVQQLKKKLAWSWVYDVDKKLEEQNARIEMLKSRIPICQAKIDQQRDQIEKLRESCSKKKAEIATMLETTSQVKQMKENLSQFLSLAKKEAFELGRDCKSKTSHIQKMVQQRKMLEQQMHDIHEQHAKNTQAEESDMAEKLKGLQDEVHAAELEVKSLKEEEAMLLSSINRQNDEIRKIADEIQDHEKKYERNMHNIRDLQQQQSNKITVFGGDKVLHLLRIIERRHQRFNMPPIGPIGAHLKLLNGNKWAVAVEHAIGRLLNSFIVTDHKDFHLLKQCAKEANCGYLRIIIYDFSTPRLTIPQHMLPDTEHNNSFCLTISKNVGNVERQVLVNDYDIGKAVAFDQKIPNLKEVYTVKGCRMFSRAKVQTVLPPSGRRGRLSSSVKEDIEKFHNEASDEQKAANECKRNKREAEIKLGELDRNMNSIKRRCINAGRSLTSKKIALEEAMHQHAAERSQEKIKEEHVLLEGLEQRRLEAVGKEDDLKVKFDKLCESTKGEISALEKAESELMEVEREMDSANEEKNHYDGVMKNKVLRDIKEAEEHYLELTKTHSSLGKIWTSENLMIRRSMFEMEAEVIDWLTGLIAMYSESIDDLRMLYAKKERKIMKRQQVYKALRQKLDACQRALLLRRSKFQRNATYLKHQLSWKFNGHLRKKGISGLIKVNYEEKTLSIEVQMPQDASNRAVQDTRGLSGGERFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAQGSQWIFITPHDTSIGLGSRRQSRLGGLRLKSGPAAAAAENSRKKHDNEEMEAEHTIGK 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi75g00079 1045 Coils Coil 696 716 - -
Sebi75g00079 1045 MobiDBLite consensus disorder prediction 1014 1045 - -
Sebi75g00079 1045 Coils Coil 347 367 - -
Sebi75g00079 1045 Coils Coil 210 230 - -
Sebi75g00079 1045 MobiDBLite consensus disorder prediction 1026 1045 - -
Sebi75g00079 1045 Pfam RecF/RecN/SMC N terminal domain 23 997 IPR003395 -
Sebi75g00079 1045 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 18 1005 - -
Sebi75g00079 1045 Coils Coil 631 672 - -
Sebi75g00079 1045 Coils Coil 369 403 - -
Sebi75g00079 1045 SUPERFAMILY Smc hinge domain 428 589 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Sebi75g00079 1045 Coils Coil 738 772 - -
Sebi75g00079 1045 Gene3D - 782 1006 IPR027417 -
Sebi75g00079 1045 Coils Coil 284 311 - -
Sebi75g00079 1045 Coils Coil 411 445 - -
Sebi75g00079 1045 Coils Coil 774 794 - -
Sebi75g00079 1045 Gene3D - 22 221 IPR027417 -
Sebi75g00079 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 22 996 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi75g00079 10 1001 Structural Maintenance of Chromosomes family AT5G61460 54.038 0.0 1033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi75g00079 K22804 - gmx:100816916 1431