Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi75g00045 ATGCAAAAGCAAGCACGTGATTTCGGCCAAAATTGGGTCACCAAGAAACAGAGATCCGTTTCCCGTGACTGTTTGAAACTCTATAGCAACACCGTTTTCCATCTCAACCGTACATTCCACGACCTCCATCTGAAGAAGAGGTGTTCACCGTTCGATGCGCAAACGTGGCTGAGCACTGCTCGAACGAACATTGAGATATGCCGAAACGGTGCGTCGGAACTGAGGATCCCAGATTTCATAGCACCCATTACGAGGAACAATGTGACAGAGATTATAAGCAATAGCTTATTCGTGAATTGGGGATTTGTGAAACATGAAGCGAGTGGTCATTACACGGAAGACATGTTTCCTAGATGGTTTTCGCCACATGAGAGGAGGCTTTTGCAGGCTTCTTCAGTGAAGGCTCATCTTGTGGTAGCGAAAGATGGTTCAGGGCATTTCAGAACAGTTCAAGGTGCTATTAATGCAGCGGCAAGGAGGAAGTTCAAAACGAGGTTTATTATATATGTGAAGAGAGGGGTTTATAGAGAGAATATTGAAGTTGATAAGACGAACGATAACATCATGCTGGTTGGTGATGGGATCAGATATACGATAATAACAAGTGGCAGGAGCGTTAAGCAAGGATTTACCACCTATAGCTCTGCAACTGCAGGAATTGATGGTCTTCACTTCATTGCACGTGGCATTACCTTCCAAAACACGGCGGGACCATTGAAGGGTCAAGCAGTGGCACTTCGATCAGCCTCTGATCTCTCTGTTTTCTACCGATGTGCCTTTGTGGGATACCAAGACACTCTCATGGTTCATGCACAGCGTCAATTTTACAGAGAATGTTACATCTATGGCACCGTTGACTTCATCTTTGGCAATGCTGCTGTGGTTTTCCAAAACTGCATGATTCTTGTCAGAAGGCCTTTAAATGGTCAAGCAAACATGATCACAGCACAAGGTAGAGATGACCCTTTTCAAAACACAGGGATTTCAATTCACAATTCTCAAATTAGGGCTGCTCCTGACCTCAAGCCCGTTCTTTCCAAATTCAACACTTTCTTGGGCCGCCCTTGGCAGAGATACTCAAGAGTTGTGGTCATGAAAACGTTCATGGATACAAACAGGGTTCGATGGCCTGGTTTTCATGTTATAACAAGCCCAACTGAGGCATCGAGCTTCACTGTTGCTAACCTCCTTGCTGGACGCACATGGTTGCCTGCCACTGGTGTGCCATTCACTTCTGGCCTTTAA 1245 0.4546 MQKQARDFGQNWVTKKQRSVSRDCLKLYSNTVFHLNRTFHDLHLKKRCSPFDAQTWLSTARTNIEICRNGASELRIPDFIAPITRNNVTEIISNSLFVNWGFVKHEASGHYTEDMFPRWFSPHERRLLQASSVKAHLVVAKDGSGHFRTVQGAINAAARRKFKTRFIIYVKRGVYRENIEVDKTNDNIMLVGDGIRYTIITSGRSVKQGFTTYSSATAGIDGLHFIARGITFQNTAGPLKGQAVALRSASDLSVFYRCAFVGYQDTLMVHAQRQFYRECYIYGTVDFIFGNAAVVFQNCMILVRRPLNGQANMITAQGRDDPFQNTGISIHNSQIRAAPDLKPVLSKFNTFLGRPWQRYSRVVVMKTFMDTNRVRWPGFHVITSPTEASSFTVANLLAGRTWLPATGVPFTSGL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi75g00045 414 Gene3D - 130 414 IPR012334 -
Sebi75g00045 414 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 4 98 IPR035513 -
Sebi75g00045 414 CDD PMEI-like_3 14 99 - -
Sebi75g00045 414 PANTHER PECTINESTERASE 16 404 - -
Sebi75g00045 414 Pfam Pectinesterase 137 370 IPR000070 GO:0030599|GO:0042545
Sebi75g00045 414 Gene3D Invertase/pectin methylesterase inhibitor family protein 2 100 IPR035513 -
Sebi75g00045 414 FunFam Pectinesterase 4 133 372 - -
Sebi75g00045 414 ProSitePatterns Pectinesterase signature 2. 281 290 IPR033131 -
Sebi75g00045 414 Pfam Plant invertase/pectin methylesterase inhibitor 19 96 IPR006501 GO:0004857
Sebi75g00045 414 SUPERFAMILY Pectin lyase-like 132 413 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi75g00045 Sebi-Chr75 1142699 1145500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi75g00045 16 414 Carbohydrate Esterase AT5G51500 59.637 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi75g00045 K01051 - gmx:100807908 677.937