Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi759g00005 ATGGGACATGTATATGAAGATAGGCTATATGTGTCCCTAGATGAGTTATGTTTTAATGCTGAGAATGGTAGTAACAGGGGAAGGATGGGTAGGAAGAACTATGATGATGACACAAGGGTGTTCAAATCCAAGAACCTTGAGACAGAAAGGAAGAGGAGGGAGAAGCTCAGTACCAGGCTTCTAATGCTGAGGTCTTTAATGAACAAGGCAACCATTATTGATGATGCTATCACATACATTAAACAGCTACAAGATGAAGTCCAGAATCTCAGCCAAGAGCTTCATGAAATGGAAGCAACCACAGAGGAAATAGAAGAGCCAAAGATAGTAGAATTTGATGCTGCTGAAGAGATGAAGAAATGGGGGGAAGAGATTGAGGTGACAAAAATGGATGGGAATAAACTTTGGGTCAAGATGATCATTGAAAATAAGAGGGGAAGGTTCAATAAATTGATGGAGACCATGCATACTTTTGGCATTGAACTGATACACACCAATGTTACAACCATGAAAGGAGCATTTCTGATTACAACCTGCATACAGGGCATGAATGGTGAAACACTTGAAGTTGATAAAATCAAACAGTTGATACCAGATATTATCAGAGTCATTTAG 615 0.3935 MGHVYEDRLYVSLDELCFNAENGSNRGRMGRKNYDDDTRVFKSKNLETERKRREKLSTRLLMLRSLMNKATIIDDAITYIKQLQDEVQNLSQELHEMEATTEEIEEPKIVEFDAAEEMKKWGEEIEVTKMDGNKLWVKMIIENKRGRFNKLMETMHTFGIELIHTNVTTMKGAFLITTCIQGMNGETLEVDKIKQLIPDIIRVI 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi759g00005 204 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 26 195 - -
Sebi759g00005 204 SMART finulus 46 89 IPR011598 GO:0046983
Sebi759g00005 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 99 IPR036638 GO:0046983
Sebi759g00005 204 Coils Coil 73 103 - -
Sebi759g00005 204 Gene3D - 39 108 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi759g00005 Sebi-Chr759 89160 90286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi759g00005 24 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 40.000 3.50e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi759g00005 - - gmx:100793107 236.884