Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi755g00040 ATGGGGAGAGCTCCTTGCTGTGAGAAAGTTGGATTGAGAAAAGGAAGATGGAGCGCTGAAGAGGATAAGATCTTAACCGATTACATCCACCAATATGGCGAAGGATCTTGGAGGTCCTTGCCCAAAAATGCAGGTTTGTTAAGGTGTGGGAAGAGTTGCAGACTAAGATGGATAAACTACTTGAGGGGAGACGTGAAGAGAGGGAACATCACTTCTCAAGAGGAACAGATCATCGTCAAGTTGCATGCTGCTCTTGGTAATAGGTGGTCTGTGATAGCAGCACATTTACCAGGAAGAACAGATAATGAAATAAAGAACTATTGGAACTCTCATTTGAGGAGAAAGATTTACTGTTTCATGAGATCATTAAATGAGTCTCCACCAATTGACATGGCTGCTGTAAATGTAGCTGTTACATCCAAGAGAAGAGGCAGAGGAGGGACAAGAAATTATAAGCCTGCATCATCCTTGGAAGAGCACAAGAAGAAATTTGAATCAATAGTGCCTAAAATGGAACCAACTTATTGTAATAAAAGAGAAGCTGAAGAAATTTCCATGATGGATGATGCTTATTTTGAAATGGATCAGGGCCACACAAATAGTACAGCTGATGGAGATATTAAGGGCTTAGGACCATATCAATGGTCAGTTGATGAAATTATGAAACTTAGTGACATGTTTGGAAATGGGGTAGGGAATTTAACCCTTCAAGAGGAACCTAATGGAAATGACTACTGTGGGCAGATGCAGATAATGGGAACAAGTCAAGAGCAGAGCAAAAGTGGTGTTTGGAGCTCATCAAATGCAGAGAGTGGAGAATGGTACACTAGTTGCTCCTCAGTGAATTCTACCATTAATTATCAATGGTGTGATTGGGATTTGGCAGGTAGTGTTCAATCCCATAATCACTGGGACCCTTGTGAAGAAGACCAAATAATGAATTGCTTGTGGGGTGCTAGCATTGCTGGAATAAATTGA 978 0.411 MGRAPCCEKVGLRKGRWSAEEDKILTDYIHQYGEGSWRSLPKNAGLLRCGKSCRLRWINYLRGDVKRGNITSQEEQIIVKLHAALGNRWSVIAAHLPGRTDNEIKNYWNSHLRRKIYCFMRSLNESPPIDMAAVNVAVTSKRRGRGGTRNYKPASSLEEHKKKFESIVPKMEPTYCNKREAEEISMMDDAYFEMDQGHTNSTADGDIKGLGPYQWSVDEIMKLSDMFGNGVGNLTLQEEPNGNDYCGQMQIMGTSQEQSKSGVWSSSNAESGEWYTSCSSVNSTINYQWCDWDLAGSVQSHNHWDPCEEDQIMNCLWGASIAGIN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi755g00040 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi755g00040 325 CDD SANT 16 61 IPR001005 -
Sebi755g00040 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi755g00040 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sebi755g00040 325 Gene3D - 11 67 - -
Sebi755g00040 325 SMART sant 66 114 IPR001005 -
Sebi755g00040 325 SMART sant 13 63 IPR001005 -
Sebi755g00040 325 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Sebi755g00040 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi755g00040 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi755g00040 325 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 178 - -
Sebi755g00040 325 CDD SANT 71 112 IPR001005 -
Sebi755g00040 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi755g00040 325 Gene3D - 71 116 - -
Sebi755g00040 325 FunFam Myb transcription factor 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi755g00040 Sebi-Chr755 437504 441186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi755g00040 1 305 MYB Transcription Factor Family AT5G49330 40.805 3.04e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi755g00040 Myb_DNA-binding 5.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi755g00040 K09422 - gmx:100819041 427.943