Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi755g00035 ATGGCACACAACTTAACGGGGCAGCTTGTGGGTTCTGAGATACATGGGTTCCACACTCTGCGGGACCTGGATATTGCCAACACTATGGAGGAAGCAAAAAGCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGTAATCATAAATATTTCACGATCCATGTCAAGCCGGTGCATTTGCCCAAAAGTGGTACTATTGTACTATTTGACCGCAAGATGCTTAGGAATTTCCGCAAAGATGGGCACAACTGGAAAAAGAAAAATGACGGGAAAACGGTCAAAGAAGCCCATGAGCACTTAAAAGTTGGTAATGAAGAAAGGATACATGTATATTATGCACATGGCCAAGATAATCAGGGCTTTGTTCGTAGATGTTACTGGTTGCTTGATAAGAGTCTGGAGCACATAGTCCTTGTTCATTATCGTGAAACACAGGAGATACAAGGTTCTCCTGTTACACCTGTAAATTCAAATTCAAGTTCTGGCTCACCGTTTATTTTGTCAGAAGACTTAGAATCTGGGACCAACAGTGCTTATACTGGTGGGCTTAATGGAAATTTAACAGTCAAAAATCATGAACTAAGGCTTCATGAGATTAATACACTTGAATGGGATGACCTGGTTTCAAATGTTAACACCTCTACTATACCTAATGGAGGCAATGAACCATGTTTATATCAAGAAAATCAAAGTTTACTGAATGGAAGCTTTGGCAACGTTGCCAGTAATCCTTCTGCAGAAATTCCTTCTTTTGGTAATTTAACCCAGTCAATTTCTGGGAGCACTACTGTTCCTTACTGTTATTCAGAAAGTATTAATCTTCAGAGTAATCATCCTATACCTTTTGGTGGTGTTGATTCTGTGGGCACTTCAGTGAATCAGGGGTTGCAAAGTCAGGATCAGGGCTTGCAGAGTCAGGACAGCTTCGGGAAGTGGATAAACAACATGATATCTGATACACCATGTTCTGTAGATGAGCCAGCTCTTGAATCATCAATTTCTTCATCTGTTCATAAACCATATTCATCACTGGTGGTGGATAGTCAGCGATCTTCTCTGCCAGAACAAGTATTCAATCTCACCGAGGTGTCCCCTGTTTGGGCGTCTTCCACTGAGAAAACAAAGGTCCTGGTAACTGGATTTTTTAATCATGATTATCAACACATTGCAAAGTCCAATCTACTGTGTGTCTGTGGGGATGTAAGTGTTCCTGTAGAAATTGTTCAGGCTGGGGTTTACCGATGCTGGGTATCACCACATTCTCCTGGATTCGTGAATCTCTATTTGAGCTTTGATGGCGATAAGCCTATTAGCCAAGTTGTTAATTTTGAGTATCGCACACCTATTTTGCATGATCCTGCTGCTTCAATGGAAGAGAAATACAACTGGAATGAATTTCGACTTCAGACGAGACTTGCTCATTTGCTCTTTACTACACAAAAGAACCTTGATGTTTACTCTAGTAAAGTATCACCTAATGCACTGGAAGAGGCTAAAATTTTTTCCCTCAAAACATCATATATTTCCAAAAGTTGGCAGTACCTGATGAAGTCAACTGGTGACAATACAACTCCGTTTTCACAAGCAAAAGATGACTTGTTTGAAATTGCATTGAAAAACAAACTAAAGGAATGGCTTTTGGAACGGATTCTCTTAGGTTGTAAGACTTCTGAGTATGATGCACAGGGCCAAGGAGTAATTCATTTGTGCGCAGTTTTGGGATATACTTGGGCTATTTCCTTATTTTCATGGTCAGGCTTGTCGCTGGATTTCCGTGACAAATTTGGATGGACAGCTCTTCATTGGGCGGCATATTATGGAATGGAGAAAATGGTTGCAACTCTGTTGTCTTGTGGGGCAAGGCCAAACTTAGTCACGGATCCAACTCCAGAAAATCCTGGTGGATGTACTGCTGCTGATCTAGCTTATACTAAGGGATATGATGGTTTAGCAGCTTATCTTTCAGAGAAGTCTCTGGTTGAGCAGTTTAATGACATGAGCTTAGCTGGAAATATCAGTGGCTCACTGGAAACTAGCACATCTGATCCAGTAAATTCTGAGAACCTTACTGAGGACCAGCTGTACCTAAAGGATACATTGGCAGCTTACCGAATAACTGCTGAGGCAGCAGCACGCATACAAGCTGCATTTAGGGAGCACTCATTAAAATTGCGTTCTAAGGCAATTGAATTTTATAACCCAGAGGAAGAAGCACGCCGAATAGTAGCAGCAATGAAGATCCAACATGCCTTCCGCAACTATGAAACCAGGAAAATGATGGCAGCTGCTGCCCGGATCCAGCATAGATTCCGTACATGGAAATATCGTAGAGAATTTCTCCATATGCGACGTCAGGCTATTAGAATTCAAGCTGCATTCAGGGGCTTTCAAGTGCGGAAACAATATCGTAAAATCATATGGTCTGTTGGGGTGCTTGAGAAAGCAATCCTGCGTTGGCGTTTAAAGAGAAAAGGCTTCCGCGGCCTGCAGGTGAATCCTGTCCAAGAAATCAAAGATGAGAAGCAGGAAAGTGATGTAGAAGAGGATTTCTTCCGAACTGGTAGAAAACAAGCAGAAGAACGTGTTGAGAGGTCTGTGGTACGTGTCCAGGCCATGTTCCGTTCCAAGAAAGCACAACAAGAGTATACCAGGATGAAGATGGCACATAGTCAAGTGAAGCTGGAACTGGAATTAGAAGAACTACTCAATTCTGAAGTTGACATGTTAACAACGCAGACATCCTAG 2748 0.4203 MAHNLTGQLVGSEIHGFHTLRDLDIANTMEEAKSRWLRPNEIHAILCNHKYFTIHVKPVHLPKSGTIVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNQGFVRRCYWLLDKSLEHIVLVHYRETQEIQGSPVTPVNSNSSSGSPFILSEDLESGTNSAYTGGLNGNLTVKNHELRLHEINTLEWDDLVSNVNTSTIPNGGNEPCLYQENQSLLNGSFGNVASNPSAEIPSFGNLTQSISGSTTVPYCYSESINLQSNHPIPFGGVDSVGTSVNQGLQSQDQGLQSQDSFGKWINNMISDTPCSVDEPALESSISSSVHKPYSSLVVDSQRSSLPEQVFNLTEVSPVWASSTEKTKVLVTGFFNHDYQHIAKSNLLCVCGDVSVPVEIVQAGVYRCWVSPHSPGFVNLYLSFDGDKPISQVVNFEYRTPILHDPAASMEEKYNWNEFRLQTRLAHLLFTTQKNLDVYSSKVSPNALEEAKIFSLKTSYISKSWQYLMKSTGDNTTPFSQAKDDLFEIALKNKLKEWLLERILLGCKTSEYDAQGQGVIHLCAVLGYTWAISLFSWSGLSLDFRDKFGWTALHWAAYYGMEKMVATLLSCGARPNLVTDPTPENPGGCTAADLAYTKGYDGLAAYLSEKSLVEQFNDMSLAGNISGSLETSTSDPVNSENLTEDQLYLKDTLAAYRITAEAAARIQAAFREHSLKLRSKAIEFYNPEEEARRIVAAMKIQHAFRNYETRKMMAAAARIQHRFRTWKYRREFLHMRRQAIRIQAAFRGFQVRKQYRKIIWSVGVLEKAILRWRLKRKGFRGLQVNPVQEIKDEKQESDVEEDFFRTGRKQAEERVERSVVRVQAMFRSKKAQQEYTRMKMAHSQVKLELELEELLNSEVDMLTTQTS 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi755g00035 915 SMART ANK_2a 596 625 IPR002110 GO:0005515
Sebi755g00035 915 SMART ANK_2a 635 666 IPR002110 GO:0005515
Sebi755g00035 915 ProSiteProfiles Ankyrin repeat region circular profile. 596 624 - -
Sebi755g00035 915 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Sebi755g00035 915 Pfam Ankyrin repeats (3 copies) 538 625 IPR002110 GO:0005515
Sebi755g00035 915 FunFam Calmodulin-binding transcription activator 5 355 451 - -
Sebi755g00035 915 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Sebi755g00035 915 ProSiteProfiles Ankyrin repeat profile. 596 628 IPR002110 GO:0005515
Sebi755g00035 915 SUPERFAMILY E set domains 360 447 IPR014756 -
Sebi755g00035 915 SUPERFAMILY Ankyrin repeat 534 658 IPR036770 -
Sebi755g00035 915 Gene3D - 759 807 - -
Sebi755g00035 915 Gene3D Immunoglobulins 355 450 IPR013783 -
Sebi755g00035 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 696 810 IPR027417 -
Sebi755g00035 915 SMART iq_5 740 762 IPR000048 GO:0005515
Sebi755g00035 915 SMART iq_5 862 884 IPR000048 GO:0005515
Sebi755g00035 915 SMART iq_5 782 804 IPR000048 GO:0005515
Sebi755g00035 915 FunFam Calmodulin-binding transcription activator 2 759 807 - -
Sebi755g00035 915 ProSiteProfiles IQ motif profile. 760 786 IPR000048 GO:0005515
Sebi755g00035 915 ProSiteProfiles IQ motif profile. 864 892 IPR000048 GO:0005515
Sebi755g00035 915 SMART CG_1_2 29 146 IPR005559 GO:0003677
Sebi755g00035 915 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Sebi755g00035 915 FunFam calmodulin-binding transcription activator 5 526 666 - -
Sebi755g00035 915 ProSiteProfiles IQ motif profile. 741 770 IPR000048 GO:0005515
Sebi755g00035 915 Gene3D - 523 665 IPR036770 -
Sebi755g00035 915 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 892 - -
Sebi755g00035 915 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi755g00035 Sebi-Chr755 335197 344027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi755g00035 29 896 CAMTA Transcription Factor Family AT3G16940 56.651 0.0 959
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Sebi755g00035 CG-1 6.4e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi755g00035 K21596 - gmx:100819198 1441.79