Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi755g00018 ATGGTTCCACCTTGTAACCCAACAAAGGACAATAAACACTCCACTCCTTTAGCCTCAGTTGAGATCTTGAAGAACTATGGCAAGGGCTTCAAGCGGTTATGTGATGATCATGAAGGAAAAATCCTGCATCCAGCTGTACACACAAATGAACTTGGGAGAAAGCTATCAACAGAAGATGTCATGAAGATAGCTGGAACAAGGTTCATTCAAATTCAATCATCTTCACAATCAGAAGGTTTGCACTTATTGGTTAATCATCCTTTTAGTTTTTCCTTCTCTGAACTCACTGATGAAGAGAAAGAGGATGTGGAACTTGCTGAGTCACTCTTGGCTTGTGCTGAGAAAGTTGGCTATCAACAGTTTGAACGCGCTAGTAAATTGCTGAGTCATTGTGAATCACTGTGTTCCAAAACAGGGAACCCTGTTAAGCGTGTTGTTCATTATTTTGCTGAAGCTCTTCGCCAAAAGATAGATAGTGAAACAGGAAGGGTTTCATCTAAGGATTTGCAAAAGATTGTGTCATTTGATCCTGAAGAGGAAAACAAGTATATAAACCCCACTCTTTTTGCATTTTATGAAGTGCTTCCTTTCTGTAAGGTTACAGTGTTCACAGCAGTTCAAGCTATAATAGAAAATGTAACTGAGGCAAAGAAGATTCATGTTATTGATCTTGAAATCAGAAAGGGGGTACAATGGACAATCCTTATGCAAGCACTTGAGTCAAGACATGAATGTCCAATTGAGCTTCTAAAGATAACAGCTATTGTAAGTGGAACCACTTCAAAGCTTATGATTGAAGACACTGGTGAGAGATTGAAGGATTTTGCACAGAGCTTGAACTTACCTTTCTCATTCAATATAGTTATGGTATCAGACATGCTACATCTCAAAGAAGATCTTTTTGAAATAGATCCTGAGGAAACAGTTACAGTTTACTCTCAGTTTGCACTTAGAAGCAAGATTCAACAATCAGAACAGCTTGAATCTCTCATGAGAGTGATTAGAACCATTAGTCCTGTAGTAATGGTGGTAGCTGAACTTGAGGCTAACCACAATTCTACATCTTTTGTGAACCGTTTCATTGAAGCTCTTTTCTACTTCAGTGCATTCTTTGATTGTCTTGAGGCTTGTATGGAACGGGATGAGCAGAACCGAATGGATATAGAATCACTGTTCGGTCTTGGAATCAGGAATATGATGGGTGCAGAGGGAGCAGAAAGAAAGAGTAGAAGTGTAAAGATTGATGTGTGGAGGGCATTTTTCTCGCGCTTTGGAATGGTGGAGACAGAATTGAGCACAATATCTCTATTCCAAGCGGAACTTGTGGCTAAAAGATTTCCTTGTGGAAGTTCTTGCACATTGGATATGAATGGGCATAGCCTTCTTATTGGGTGGAAGGGAACACCAATTAACTCTGTTTCTGTCTGGAAATTTATGTGA 1440 0.3944 MVPPCNPTKDNKHSTPLASVEILKNYGKGFKRLCDDHEGKILHPAVHTNELGRKLSTEDVMKIAGTRFIQIQSSSQSEGLHLLVNHPFSFSFSELTDEEKEDVELAESLLACAEKVGYQQFERASKLLSHCESLCSKTGNPVKRVVHYFAEALRQKIDSETGRVSSKDLQKIVSFDPEEENKYINPTLFAFYEVLPFCKVTVFTAVQAIIENVTEAKKIHVIDLEIRKGVQWTILMQALESRHECPIELLKITAIVSGTTSKLMIEDTGERLKDFAQSLNLPFSFNIVMVSDMLHLKEDLFEIDPEETVTVYSQFALRSKIQQSEQLESLMRVIRTISPVVMVVAELEANHNSTSFVNRFIEALFYFSAFFDCLEACMERDEQNRMDIESLFGLGIRNMMGAEGAERKSRSVKIDVWRAFFSRFGMVETELSTISLFQAELVAKRFPCGSSCTLDMNGHSLLIGWKGTPINSVSVWKFM 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi755g00018 479 ProSiteProfiles GRAS family profile. 96 477 IPR005202 -
Sebi755g00018 479 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 467 IPR005202 -
Sebi755g00018 479 Pfam GRAS domain family 106 477 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi755g00018 Sebi-Chr755 164101 165540 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi755g00018 95 478 GRAS Transcription Factor Family AT3G03450 31.969 1.27e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi755g00018 GRAS 6.2e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi755g00018 - - gmx:100798926 694.115